RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 RAB22AQ9UL26 194 aa6.67□□□□□ -1.34
USF1-210ENST00000531842 LOC102724200A0A096LPH7 203 aaPredicted RBP6.66□□□□□ -1.34
USF1-210ENST00000531842 J3QRK9 145 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 S1PR2O95136 353 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 CRYZL1O95825 349 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 FCGR3AP08637 254 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 OR9G9P0C7N8 305 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 SDC2P34741 201 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 NANOS2P60321 138 aaKnown RBP6.66□□□□□ -1.34
USF1-210ENST00000531842 ATP5G2Q06055 141 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 ARFRP1Q13795 201 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 PRSS8Q16651 343 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 TM4SF20Q53R12 229 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 OR52B4Q8NGK2 314 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 OR2K2Q8NGT1 345 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 OR5H6Q8NGV6 325 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 OR10R2Q8NGX6 335 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 ACOT12Q8WYK0 555 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 FCGR1BQ92637 280 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 SLC25A38Q96DW6 304 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 YIPF6Q96EC8 236 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 Q9H521 79 aa6.66□□□□□ -1.34
USF1-210ENST00000531842 TRBV6-7A0A0A0MS04 114 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 NOTOA8MTQ0 251 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 PDCD5O14737 125 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 SPRY2O43597 315 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 SSX5O60225 188 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 TUSC2O75896 110 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 OR2J3O76001 311 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 CD36P16671 472 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 CTRB1P17538 263 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 RPL35AP18077 110 aaKnown RBP6.65□□□□□ -1.34
USF1-210ENST00000531842 RAB6AP20340 208 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 FCGR2BP31994 310 aaPredicted RBP6.65□□□□□ -1.34
USF1-210ENST00000531842 UBE2KP61086 200 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 MXD1Q05195 221 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 TMEM177Q53S58 311 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 LGALS9CQ6DKI2 356 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 CTRB2Q6GPI1 263 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 SFXN4Q6P4A7 337 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 BTNL8Q6UX41 500 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 LAX1Q8IWV1 398 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 TEX45Q8NA69 505 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 ADTRPQ96IZ2 230 aa6.65□□□□□ -1.34
USF1-210ENST00000531842 KLK5Q9Y337 293 aaPredicted RBP6.65□□□□□ -1.34
USF1-210ENST00000531842 DNAH11Q96DT5 4516 aa6.65□□□□□ -1.35
USF1-210ENST00000531842 IGHV3-35A0A0C4DH35 117 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 TMEM213A2RRL7 107 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 DPPA5A6NC42 116 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 METTL21EPA6NDL7 271 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 HMX3A6NHT5 357 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 FAM223BA6NKX1 122 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 DEFB4AO15263 64 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 XRCC3O43542 346 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 AIREO43918 545 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 CREBL2O60519 120 aaPredicted RBP6.64□□□□□ -1.35
USF1-210ENST00000531842 SMIM18P0DKX4 95 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 HIST1H1DP16402 221 aaKnown RBP6.64□□□□□ -1.35
USF1-210ENST00000531842 CBLN1P23435 193 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 MYL9P24844 172 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 ZNF124Q15973 351 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 SLC16A13Q7RTY0 426 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 TPRA1Q86W33 373 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 FAM223AQ8IWN6 122 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 UXS1Q8NBZ7 420 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 LGALS14Q8TCE9 139 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 SRSF12Q8WXF0 261 aaKnown RBP6.64□□□□□ -1.35
USF1-210ENST00000531842 SPIN2AQ99865 258 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 SPIN2BQ9BPZ2 258 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 CABLES2Q9BTV7 478 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 FBXL17Q9UF56 701 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 DAPK2Q9UIK4 370 aa6.64□□□□□ -1.35
USF1-210ENST00000531842 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.63□□□□□ -1.35
USF1-210ENST00000531842 LOC100506127A0A0U1RQW1 187 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 ZNF320A2RRD8 509 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 FCGR3BO75015 233 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 DIRAS3O95661 229 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 PTHLHP12272 177 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 DUTP33316 252 aaKnown RBP6.63□□□□□ -1.35
USF1-210ENST00000531842 RPS19P39019 145 aaKnown RBP6.63□□□□□ -1.35
USF1-210ENST00000531842 C15orf32Q32M92 178 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 CDNFQ49AH0 187 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 OR2B11Q5JQS5 317 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 ZNF57Q68EA5 555 aaPredicted RBP6.63□□□□□ -1.35
USF1-210ENST00000531842 CLEC19AQ6UXS0 136 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 UNQ9165/PRO28630Q6UXU0 137 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 SLC25A42Q86VD7 318 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 MMD2Q8IY49 270 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 NECAP1Q8NC96 275 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 TSPAN14Q8NG11 270 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 OSR1Q8TAX0 266 aaPredicted RBP6.63□□□□□ -1.35
USF1-210ENST00000531842 KCTD12Q96CX2 325 aaKnown RBP6.63□□□□□ -1.35
USF1-210ENST00000531842 CCDC140Q96MF4 163 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 ATG5Q9H1Y0 275 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 ZNF430Q9H8G1 570 aaPredicted RBP6.63□□□□□ -1.35
USF1-210ENST00000531842 SSR3Q9UNL2 185 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 PRELID3BQ9Y3B1 194 aa6.63□□□□□ -1.35
USF1-210ENST00000531842 HSPG2P98160 4391 aa6.62□□□□□ -1.35
USF1-210ENST00000531842 TRBV9A0A0B4J1U6 114 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms