RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 STRADBQ9C0K7 418 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 COPS7AQ9UBW8 275 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 SPAARA0A1B0GVQ0 90 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 PMS2P5A8MQ11 134 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 RPL8P62917 257 aaKnown RBP11.83□□□□□ -0.52
PCF11-204ENST00000530660 RPL24P83731 157 aaKnown RBP11.83□□□□□ -0.52
PCF11-204ENST00000530660 MEF2CQ06413 473 aaPredicted RBP11.83□□□□□ -0.52
PCF11-204ENST00000530660 SHISA6Q6ZSJ9 500 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 LHFPL2Q6ZUX7 228 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 Q8N7P7 452 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 ZNF611Q8N823 705 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 PIGCQ92535 297 aa11.83□□□□□ -0.52
PCF11-204ENST00000530660 ZG16O60844 167 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 ZXDAP98168 799 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 SPACA3Q8IXA5 215 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 OR2W1Q9Y3N9 320 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 AMY1AP04745 511 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 SPINK2P20155 84 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 MC5RP33032 325 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 WDR74Q6RFH5 385 aaPredicted RBP11.82□□□□□ -0.52
PCF11-204ENST00000530660 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 ULBP2Q9BZM5 246 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 TNFRSF19Q9NS68 423 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 OR1A1Q9P1Q5 309 aa11.82□□□□□ -0.52
PCF11-204ENST00000530660 H0Y8G0 127 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 HLA-DQA1P01909 254 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 USF1P22415 310 aaPredicted RBP11.81□□□□□ -0.52
PCF11-204ENST00000530660 FGFRL1Q8N441 504 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 OR5A2Q8NGI9 324 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 TMEM45BQ96B21 275 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 C10orf35Q96D05 121 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 AP1S3Q96PC3 154 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 CHODLQ9H9P2 273 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 AGFG2O95081 481 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 IGLV2-14P01704 120 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 FBLP22087 321 aaKnown RBP11.81□□□□□ -0.52
PCF11-204ENST00000530660 ST8SIA1Q92185 356 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 PERPQ96FX8 193 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 LRP4O75096 1905 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 APOA2P02652 100 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 CRYBB3P26998 211 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 GPR183P32249 361 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 PMCHL2Q9BQD1 86 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 SERTAD4Q9NUC0 356 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 KCNS2Q9ULS6 477 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 ZNF835Q9Y2P0 537 aa11.81□□□□□ -0.52
PCF11-204ENST00000530660 HEATR1Q9H583 2144 aaKnown RBP11.81□□□□□ -0.52
PCF11-204ENST00000530660 TEX48A0A1B0GUV7 120 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 CA3P07451 260 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 BCL3P20749 454 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 CKS1BP61024 79 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 YPEL5P62699 121 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 Q6ZSR3 168 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 ZNF837Q96EG3 531 aaPredicted RBP11.8□□□□□ -0.52
PCF11-204ENST00000530660 FRYQ5TBA9 3013 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 A6NJY4 79 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 PQLC2Q6ZP29 291 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 ZNF441Q8N8Z8 693 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 CLDN23Q96B33 292 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 NPFFR1Q9GZQ6 430 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 TNRC6AQ8NDV7 1962 aaKnown RBP11.8□□□□□ -0.52
PCF11-204ENST00000530660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.8□□□□□ -0.52
PCF11-204ENST00000530660 KIR2DS1A0A191URI9 304 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 CD1BP29016 333 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 KIR2DS4P43632 304 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 KIR2DS1Q14954 304 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 SLC23A3Q6PIS1 610 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 PARM1Q6UWI2 310 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 ZNF788Q6ZQV5 615 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 SSBP4Q9BWG4 385 aaPredicted RBP11.8□□□□□ -0.52
PCF11-204ENST00000530660 SCRT2Q9NQ03 307 aa11.8□□□□□ -0.52
PCF11-204ENST00000530660 SPTBN5Q9NRC6 3674 aaKnown RBP11.8□□□□□ -0.52
PCF11-204ENST00000530660 K7EP34 96 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 PATE4P0C8F1 98 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 HIST1H1AQ02539 215 aaPredicted RBP11.79□□□□□ -0.52
PCF11-204ENST00000530660 RNFT1Q5M7Z0 435 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 Q6ZS49 121 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 RAB37Q96AX2 223 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 PRDM6Q9NQX0 595 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 OBP2AQ9NY56 170 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 HILPDAQ9Y5L2 63 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 CGAP01215 116 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 CCL5P13501 91 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 G6PCP35575 357 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 ZNF718Q3SXZ3 478 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 OR2K2Q8NGT1 345 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 SPTSSAQ969W0 71 aa11.79□□□□□ -0.52
PCF11-204ENST00000530660 ZNF48Q96MX3 618 aaPredicted RBP11.79□□□□□ -0.52
PCF11-204ENST00000530660 SSBP3Q9BWW4 388 aaPredicted RBP11.79□□□□□ -0.52
PCF11-204ENST00000530660 SRFP11831 508 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 TNFRSF4P43489 277 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 C17orf67Q0P5P2 114 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 FOXL2NBQ6ZUU3 175 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 PSG11Q9UQ72 335 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 ZNHIT1O43257 154 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 HTR1DP28221 377 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 GNG4P50150 75 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 FABP6P51161 128 aa11.78□□□□□ -0.52
PCF11-204ENST00000530660 FAM168AQ92567 244 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms