RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ATP6V1G2-DDX39BF2Z307 99 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 FXYD1O00168 92 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 TXNDC9O14530 226 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 COPEO14579 308 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 ERP29P30040 261 aaKnown RBP2.5□□□□□ -2.01
CASP4-208ENST00000530309 RPL22P35268 128 aaKnown RBP2.5□□□□□ -2.01
CASP4-208ENST00000530309 ACTR1BP42025 376 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 CXCR4P61073 352 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 COPZ1P61923 177 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 DYNLL1P63167 89 aaKnown RBP2.5□□□□□ -2.01
CASP4-208ENST00000530309 GTF2BQ00403 316 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 PSG4Q00888 419 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 TSPAN31Q12999 210 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 RBM48Q5RL73 367 aaKnown RBP2.5□□□□□ -2.01
CASP4-208ENST00000530309 LCN8Q6JVE9 175 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 FAM45BPQ6NSW5 357 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 ZNF322Q6U7Q0 402 aaPredicted RBP2.5□□□□□ -2.01
CASP4-208ENST00000530309 ALKAL1Q6UXT8 129 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 SNX29P2Q8IUI4 249 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 CRLF3Q8IUI8 442 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 TMEM35BQ8NCS4 154 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 OR5D18Q8NGL1 313 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 CD200R1Q8TD46 325 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 GALMQ96C23 342 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 OR52B2Q96RD2 323 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 UGT2B28Q9BY64 529 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 METTL17Q9H7H0 456 aaPredicted RBP2.5□□□□□ -2.01
CASP4-208ENST00000530309 PAQR5Q9NXK6 330 aaPredicted RBP2.5□□□□□ -2.01
CASP4-208ENST00000530309 USE1Q9NZ43 259 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 NUP205Q92621 2012 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 UBR1Q8IWV7 1749 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 TNS3Q68CZ2 1445 aa2.5□□□□□ -2.01
CASP4-208ENST00000530309 DLEC1Q9Y238 1755 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 FMN2Q9NZ56 1722 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 hCG_1818297A0A087WSY0 165 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 CLDN24A6NM45 220 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 TRPC5OSA6NMA1 111 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 J3QLI3 93 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 BANF1O75531 89 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 PIAS1O75925 651 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 LYPLA2O95372 231 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 HLA-DRAP01903 254 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 C1QBP02746 253 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 IFNA16P05015 189 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 RBP1P09455 135 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 SERPINB9P50453 376 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 PSME3P61289 254 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 SLC35A2P78381 396 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 KRR1Q13601 381 aaKnown RBP2.49□□□□□ -2.01
CASP4-208ENST00000530309 LRRC26Q2I0M4 334 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 SPIN4Q56A73 249 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 CLLU1Q5K131 121 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 PDPK2PQ6A1A2 396 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 TTC33Q6PID6 262 aaPredicted RBP2.49□□□□□ -2.01
CASP4-208ENST00000530309 PHF13Q86YI8 300 aaPredicted RBP2.49□□□□□ -2.01
CASP4-208ENST00000530309 C9orf62Q8N4C0 152 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 OR10P1Q8NGE3 313 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 OR52E4Q8NGH9 312 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 OR4P4Q8NGL7 312 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 CANT1Q8WVQ1 401 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 KLF6Q99612 283 aaPredicted RBP2.49□□□□□ -2.01
CASP4-208ENST00000530309 LXNQ9BS40 222 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 CCDC32Q9BV29 185 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 SLC19A3Q9BZV2 496 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 SCML1Q9UN30 329 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 PRELID3BQ9Y3B1 194 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 ASB4Q9Y574 426 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 KIF13AQ9H1H9 1805 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 MAST2Q6P0Q8 1798 aa2.49□□□□□ -2.01
CASP4-208ENST00000530309 KCPQ6ZWJ8 1503 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 C5P01031 1676 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 DOCK2Q92608 1830 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 LINC00587B1AMM8 73 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 B4DEV8 164 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 CALUO43852 315 aaPredicted RBP2.48□□□□□ -2.01
CASP4-208ENST00000530309 CRTAPO75718 401 aaPredicted RBP2.48□□□□□ -2.01
CASP4-208ENST00000530309 RAB36O95755 333 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 IFNA14P01570 189 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 IL7P13232 177 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 GZMHP20718 246 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 PSMA1P25786 263 aaKnown RBP2.48□□□□□ -2.01
CASP4-208ENST00000530309 SERPINB1P30740 379 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 GABRA3P34903 492 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 SNRPFP62306 86 aaKnown RBP2.48□□□□□ -2.01
CASP4-208ENST00000530309 EMX1Q04741 257 aaPredicted RBP2.48□□□□□ -2.01
CASP4-208ENST00000530309 COQ5Q5HYK3 327 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 PABPC1L2AQ5JQF8 200 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 HENMT1Q5T8I9 393 aaKnown RBP2.48□□□□□ -2.01
CASP4-208ENST00000530309 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 EBLN2Q6P2I7 272 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 DCUN1D2Q6PH85 259 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 ZNF720Q7Z2F6 126 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 VN1R4Q7Z5H5 301 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 FUNDC1Q8IVP5 155 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 ZBTB8OSQ8IWT0 167 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 TESCQ96BS2 214 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 ZHX1-C8orf76Q96EF9 292 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 C9orf16Q9BUW7 83 aa2.48□□□□□ -2.01
CASP4-208ENST00000530309 TUBA4BQ9H853 241 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms