RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 FAM90A14PP0C7W9 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FAM90A24PP0C7X0 464 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 LYZP61626 148 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 SERF2P84101 59 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 ZNRD1Q9P1U0 126 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 TCF19Q9Y242 345 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 C2CD3Q4AC94 2353 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 C16orf97H3BN30 126 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 K7N7A8 449 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 SLC17A3O00476 420 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 TGOLN2O43493 480 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 SLC25A17O43808 307 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 WISP2O76076 250 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 ADH4P08319 380 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 CCL3L1P16619 93 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 ID3Q02535 119 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 PNRC1Q12796 327 aaPredicted RBP10.38□□□□□ -0.75
SCN3B-206ENST00000530277 TEPPQ6URK8 271 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 ZNF525Q8N782 197 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 RPEQ96AT9 228 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 PAM16Q9Y3D7 125 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 SONP18583 2426 aaKnown RBP10.38□□□□□ -0.75
SCN3B-206ENST00000530277 SERTM2A0A1B0GWG4 89 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 DUXBA0A1W2PPF3 345 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 COLCA2A8K830 154 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 SNURFLB1AK76 121 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 LYNX1G3V0Z9 82 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 IGKV1-5P01602 117 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 CT45A6P0DMU7 189 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 CT45A5P0DMU8 189 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 CT45A7P0DMV0 189 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 LYNX1P0DP58 116 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 AMTP48728 403 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 ARL16Q0P5N6 197 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 ICAM4Q14773 271 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 GABRA6Q16445 453 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 CT45A1Q5HYN5 189 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 RPRMLQ8N4K4 120 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 CT45A3Q8NHU0 189 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 HILPDAQ9Y5L2 63 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 FRYLO94915 3013 aa10.38□□□□□ -0.75
SCN3B-206ENST00000530277 TMEM210A6NLX4 147 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 OR4A8P0C604 315 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 COX5BP10606 129 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 MPZP25189 248 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 ZNF137PP52743 207 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 ZNF124Q15973 351 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 TGIF2LYQ8IUE0 185 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 KIR3DL3Q8N743 410 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 FLYWCH2Q96CP2 140 aaKnown RBP10.37□□□□□ -0.75
SCN3B-206ENST00000530277 TMEM56Q96MV1 263 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 IMMP2LQ96T52 175 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 SSBP3Q9BWW4 388 aaPredicted RBP10.37□□□□□ -0.75
SCN3B-206ENST00000530277 BARX1Q9HBU1 254 aaPredicted RBP10.37□□□□□ -0.75
SCN3B-206ENST00000530277 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 DYSFO75923 2080 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 HSBP1O75506 76 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 CXCL1P09341 107 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 ATP6V1FQ16864 119 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 ZNF324BQ6AW86 544 aaPredicted RBP10.37□□□□□ -0.75
SCN3B-206ENST00000530277 CDPF1Q6NVV7 123 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 DNM1P46Q6ZS02 220 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 OR4X1Q8NH49 305 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 ZDHHC8Q9ULC8 765 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 IGHV2OR16-5A0A0B4J2B6 119 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 HPRT1P00492 218 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 RAB7AP51149 207 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 DPPA3Q6W0C5 159 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 SAXO1Q8IYX7 474 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 HIF1ANQ9NWT6 349 aa10.37□□□□□ -0.75
SCN3B-206ENST00000530277 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 IGHV3OR16-8A0A075B7F1 116 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 GATCO43716 136 aaKnown RBP10.36□□□□□ -0.75
SCN3B-206ENST00000530277 NAPSAO96009 420 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 CD5P06127 495 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 IL3RAP26951 378 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 CRYBB3P26998 211 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 DDTP30046 118 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 S100A7P31151 101 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 WDR82Q6UXN9 313 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 DOLPP1Q86YN1 238 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 CLDND2Q8NHS1 167 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 LTBP2Q14767 1821 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 RAB29O14966 203 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 ZNF253O75346 499 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 CRISP2P16562 243 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 RNASEKQ6P5S7 137 aaKnown RBP10.36□□□□□ -0.75
SCN3B-206ENST00000530277 LINC00596Q86U02 117 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 CORO2AQ92828 525 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 EAF1Q96JC9 268 aaPredicted RBP10.36□□□□□ -0.75
SCN3B-206ENST00000530277 CBLN4Q9NTU7 201 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 TECRQ9NZ01 308 aaKnown RBP10.36□□□□□ -0.75
SCN3B-206ENST00000530277 ABCA2Q9BZC7 2435 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 LOC102723971A0A1B0GUV8 181 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 CNN1P51911 297 aaKnown RBP10.36□□□□□ -0.75
SCN3B-206ENST00000530277 OR8I2Q8N0Y5 310 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 PLSCR2Q9NRY7 297 aa10.36□□□□□ -0.75
SCN3B-206ENST00000530277 HELTA6NFD8 242 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms