RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 PLPP3O14495 311 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 XKRYO14609 159 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 SLC16A7O60669 478 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 ADAP1O75689 374 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 CRTAPO75718 401 aaPredicted RBP3.18□□□□□ -1.9
USP47-209ENST00000530041 IFNA17P01571 189 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 PMP2P02689 132 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 TTRP02766 147 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 OR8U9P0C7N5 309 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 CBR1P16152 277 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 CTLA4P16410 223 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 ZNF14P17017 642 aaPredicted RBP3.18□□□□□ -1.9
USP47-209ENST00000530041 CXCR1P25024 350 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 CRABP1P29762 137 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 GPX4P36969 197 aaPredicted RBP3.18□□□□□ -1.9
USP47-209ENST00000530041 MDH2P40926 338 aaKnown RBP3.18□□□□□ -1.9
USP47-209ENST00000530041 RPL29P47914 159 aaKnown RBP3.18□□□□□ -1.9
USP47-209ENST00000530041 TFPI2P48307 235 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 RAB5CP51148 216 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 P2RY4P51582 365 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 BIDP55957 195 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 RAP1BP61224 184 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 RAP1AP62834 184 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 GUK1Q16774 197 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 FAM78AQ5JUQ0 283 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 AADACL3Q5VUY0 350 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 C1orf140Q5VVS0 124 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 HEPN1Q6WQI6 88 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 HIST2H3AQ71DI3 136 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 OR5AS1Q8N127 324 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 LRRC18Q8N456 261 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 UBAC2Q8NBM4 344 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 CHST4Q8NCG5 386 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 SLC26A10Q8NG04 563 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 OR13G1Q8NGZ3 307 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 OR8U1Q8NH10 309 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 OR51F2Q8NH61 342 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 RNF133Q8WVZ7 376 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 TNFRSF14Q92956 283 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 CMBLQ96DG6 245 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 CPNE2Q96FN4 548 aaPredicted RBP3.18□□□□□ -1.9
USP47-209ENST00000530041 OR10C1Q96KK4 312 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 ZNF285Q96NJ3 590 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 S100A13Q99584 98 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 KLHDC3Q9BQ90 382 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 GINS3Q9BRX5 216 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 GGACTQ9BVM4 153 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 OPN3Q9H1Y3 402 aaPredicted RBP3.18□□□□□ -1.9
USP47-209ENST00000530041 UCK1Q9HA47 277 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 TAF9BQ9HBM6 251 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 PRTFDC1Q9NRG1 225 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 MMP17Q9ULZ9 603 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 RCL1Q9Y2P8 373 aaKnown RBP3.18□□□□□ -1.9
USP47-209ENST00000530041 HDGFL3Q9Y3E1 203 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 FANCMQ8IYD8 2048 aa3.18□□□□□ -1.9
USP47-209ENST00000530041 A0A087WWC5 75 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 BORCS7-ASMTA0A0B4J1R7 106 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 FTCDNL1E5RQL4 147 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 H3BSH0 61 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 K7N7A8 449 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 XRCC2O43543 280 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 HCRTR1O43613 425 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 DEDDO75618 318 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 NSA2O95478 260 aaKnown RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 IFNA10P01566 189 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 APODP05090 189 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 CTSDP07339 412 aaPredicted RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 RBMY1CP0DJD4 496 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 HIST1H1DP16402 221 aaKnown RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 CCL1P22362 96 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 RPL12P30050 165 aaKnown RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 ACTR1BP42025 376 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 SULT1A1P50225 295 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 SSR4P51571 173 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 EMP2P54851 167 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 CLDN6P56747 220 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 TAS2R46P59540 309 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 RAB2AP61019 212 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 RPS23P62266 143 aaKnown RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 GLO1Q04760 184 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 CLINT1Q14677 625 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 ARL6IP1Q15041 203 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 EBPQ15125 230 aaKnown RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 SLC9A3R2Q15599 337 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 DEFB115Q30KQ5 88 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 NSUN5P1Q3KNT7 163 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 PYY3Q5JQD4 70 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 DNM1P34Q6PK57 102 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 DUX4L9Q6RFH8 374 aaPredicted RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 LINC00336Q6ZUF6 198 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 ABHD12BQ7Z5M8 362 aaPredicted RBP3.17□□□□□ -1.9
USP47-209ENST00000530041 MARCH3Q86UD3 253 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 C9orf40Q8IXQ3 194 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 LFNGQ8NES3 379 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 OR8G5Q8NG78 346 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 OR5H2Q8NGV7 314 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 CCL4L1Q8NHW4 92 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 BAALCQ8WXS3 180 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 FGGYQ96C11 551 aa3.17□□□□□ -1.9
USP47-209ENST00000530041 MUCL1Q96DR8 90 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms