RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 GFRA3O60609 400 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 NDUFB4O95168 129 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 SLC25A53Q5H9E4 307 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF818PQ6ZRF7 136 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 SMCHD1A6NHR9 2005 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 FCGR2BP31994 310 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-221ENST00000529873 RPS11P62280 158 aaKnown RBP eCLIP7.26□□□□□ -1.25
CTNND1-221ENST00000529873 MIC13Q5XKP0 118 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 SMIM8Q96KF7 97 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 QTRT1Q9BXR0 403 aaKnown RBP7.26□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM74BQ9NUR3 256 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 FOXD3Q9UJU5 478 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-221ENST00000529873 PLXNA1Q9UIW2 1896 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 A1L4Q6 167 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 SOD3P08294 240 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 UCP3P55916 312 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 FBLN7Q53RD9 439 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 OR10AG1Q8NH19 301 aa7.26□□□□□ -1.25
CTNND1-221ENST00000529873 CSRP3P50461 194 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 HSPE1P61604 102 aaKnown RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 SLX1AQ9BQ83 275 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 C19orf24Q9BVV8 132 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 PATJQ8NI35 1801 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 SYNGR3O43761 229 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 ARL14EPLP0DKL9 152 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 ANOS1P23352 680 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 CX3CL1P78423 397 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 TGIF1Q15583 401 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 RNFT1Q5M7Z0 435 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM101Q96IK0 257 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 NRIP2Q9BQI9 281 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF703Q9H7S9 590 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 GREB1LQ9C091 1923 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 PGPA6NDG6 321 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 C17orf51A8MQB3 221 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 ASPHD2Q6ICH7 369 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 PPP1R32Q7Z5V6 425 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 OR4C13Q8NGP0 309 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 PGLYRP4Q96LB8 373 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 NPIPB11E5RHQ5 1161 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM262E9PQX1 116 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 ZG16O60844 167 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF883P0CG24 379 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 APOBEC3AP31941 199 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 RND2P52198 227 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 MRPL52Q86TS9 123 aaKnown RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 SPXQ9BT56 116 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 C5orf66Q9H5L9 145 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 GP6Q9HCN6 339 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 MRPL16Q9NX20 251 aaKnown RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 IGKV3-11P04433 115 aa7.25□□□□□ -1.25
CTNND1-221ENST00000529873 CXorf66Q5JRM2 361 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 BEX4Q9NWD9 120 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-221ENST00000529873 NUP205Q92621 2012 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 CGB1A6NKQ9 187 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 TIAF1O95411 115 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 CSRP2Q16527 193 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 LY6EQ16553 131 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 Q6ZT83 130 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 TCF23Q7RTU1 214 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 TTC9CQ8N5M4 171 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
CTNND1-221ENST00000529873 POLR2AP24928 1970 aaKnown RBP7.24□□□□□ -1.25
CTNND1-221ENST00000529873 EGR4Q05215 589 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 PQLC2Q6ZP29 291 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 TCF24Q7RTU0 167 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 RTN4RL2Q86UN3 420 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 BOD1L2Q8IYS8 172 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 GALNT14Q96FL9 552 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 CHCHD2Q9Y6H1 151 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-221ENST00000529873 ANKRD12Q6UB98 2062 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 TRBV9A0A0B4J1U6 114 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 OR11H12B2RN74 326 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 FOXH1O75593 365 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 REG1AP05451 166 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 RSPO4Q2I0M5 234 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-221ENST00000529873 ACSF3Q4G176 576 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-221ENST00000529873 OR11H1Q8NG94 326 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 OR11H2Q8NH07 326 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 OR52E5Q8NH55 327 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 LEAP2Q969E1 77 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 SPSB2Q99619 263 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 NPDC1Q9NQX5 325 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM14DPA8MWL7 114 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 PIN1P1O15428 100 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 C8orf88P0DMB2 117 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 GLIPR1P48060 266 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 C2orf83Q53S99 150 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 ACP7Q6ZNF0 438 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 PNKDQ8N490 385 aa7.24□□□□□ -1.25
CTNND1-221ENST00000529873 ZNF646O15015 1829 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-221ENST00000529873 TSPOP30536 169 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 ATP5J2P56134 94 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 TMEM95Q3KNT9 176 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 MRPL18Q9H0U6 180 aaKnown RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 PLAUP00749 431 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 THY1P04216 161 aa7.23□□□□□ -1.25
CTNND1-221ENST00000529873 MEF2BQ02080 365 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-221ENST00000529873 LDLRAD2Q5SZI1 272 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms