RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 PTHLHP12272 177 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 RPL27AP46776 148 aaKnown RBP9.86□□□□□ -0.83
CPSF1-204ENST00000529288 MFSD4AQ8N468 514 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 VSTM2AQ8TAG5 236 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 SECTM1Q8WVN6 248 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 HSD17B10Q99714 261 aaKnown RBP9.86□□□□□ -0.83
CPSF1-204ENST00000529288 NEURL2Q9BR09 285 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 SIGLEC8Q9NYZ4 499 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 ANXA10Q9UJ72 324 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 DYNC2H1Q8NCM8 4307 aaKnown RBP9.86□□□□□ -0.83
CPSF1-204ENST00000529288 TRAV18A0A075B6X5 111 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 TRBV9A0A0B4J1U6 114 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 ZNF320A2RRD8 509 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 SCGNO76038 276 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 KBTBD11O94819 623 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 NDUFB8O95169 186 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 TNFAIP8O95379 198 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 IGLV2-14P01704 120 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 REG1AP05451 166 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 MYOD1P15172 320 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 EDN2P20800 178 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 SDC2P34741 201 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 IDNKQ5T6J7 187 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 SFXN4Q6P4A7 337 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 CLEC19AQ6UXS0 136 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 ADAMTSL5Q6ZMM2 481 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 TPRA1Q86W33 373 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 TSPAN14Q8NG11 270 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 KCTD12Q96CX2 325 aaKnown RBP9.85□□□□□ -0.83
CPSF1-204ENST00000529288 YIPF6Q96EC8 236 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 EDA2RQ9HAV5 297 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 CCL28Q9NRJ3 127 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 RHBDL2Q9NX52 303 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 SLC2A8Q9NY64 477 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 ZNF257Q9Y2Q1 563 aa9.85□□□□□ -0.83
CPSF1-204ENST00000529288 STAB2Q8WWQ8 2551 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 A0A087WXM4 84 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 LOC100506127A0A0U1RQW1 187 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 TEX22C9J3V5 150 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 E7EUB6 86 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 GGCTO75223 188 aaKnown RBP9.84□□□□□ -0.83
CPSF1-204ENST00000529288 HRASP01112 189 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 IL6RP08887 468 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-204ENST00000529288 CD7P09564 240 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 SMIM18P0DKX4 95 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 DEFA4P12838 97 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 FOLR2P14207 255 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 AREGP15514 252 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 FCGR2CP31995 323 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 FXYD4P59646 89 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 DEFB125Q8N687 156 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 GVQW1Q8N7I0 195 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 BEST4Q8NFU0 473 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 OR2K2Q8NGT1 345 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 OR5H6Q8NGV6 325 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 TMEM167AQ8TBQ9 72 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 THAP7Q9BT49 309 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-204ENST00000529288 HRASLSQ9HDD0 168 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 ZC4H2Q9NQZ6 224 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 CEPT1Q9Y6K0 416 aa9.84□□□□□ -0.83
CPSF1-204ENST00000529288 LCE6AA0A183 80 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 C2orf70A6NJV1 201 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 ZNF785A8K8V0 405 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 ARL3P36405 182 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 TGFBR1P36897 503 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 MECP2P51608 486 aaKnown RBP9.83□□□□□ -0.84
CPSF1-204ENST00000529288 DEFB114Q30KQ6 69 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 ZNF66Q6ZN08 573 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 PUSL1Q8N0Z8 303 aaKnown RBP9.83□□□□□ -0.84
CPSF1-204ENST00000529288 OR13F1Q8NGS4 319 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 CACNG8Q8WXS5 425 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 WDR89Q96FK6 387 aaPredicted RBP9.83□□□□□ -0.84
CPSF1-204ENST00000529288 SLC5A7Q9GZV3 580 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 SLC2A9Q9NRM0 540 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 SACSQ9NZJ4 4579 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 RYR2Q92736 4967 aa9.83□□□□□ -0.84
CPSF1-204ENST00000529288 NPIPB5A8MRT5 1133 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 OR11H12B2RN74 326 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 SULT1C2O00338 296 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 DHFRP00374 187 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 RPA2P15927 270 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 HLA-GP17693 338 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 PSMB6P28072 239 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 MAS1LP35410 378 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 KIR2DS2P43631 304 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 BRWD1-AS2P59051 145 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 RPL8P62917 257 aaKnown RBP9.82□□□□□ -0.84
CPSF1-204ENST00000529288 EIF4EBP1Q13541 118 aaPredicted RBP9.82□□□□□ -0.84
CPSF1-204ENST00000529288 SPAG16Q8N0X2 631 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 EEF1AKMT3Q96AZ1 226 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 SRD5A3Q9H8P0 318 aa9.82□□□□□ -0.84
CPSF1-204ENST00000529288 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 A0A1B0GW64 132 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 MEIS3P1A6NDR6 274 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 PPYP01298 95 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 ZNF735P0CB33 412 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 FAM106AQ4KMX7 169 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 FAM209BQ5JX69 171 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms