RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SPCS3P61009 180 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 TMEM41BQ5BJD5 291 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 DEFB108BQ8NET1 73 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 SFT2D1Q8WV19 159 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 CCL13Q99616 98 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 WDR61Q9GZS3 305 aaKnown RBP9.68□□□□□ -0.86
USF1-208ENST00000528768 LINC00574Q9H8X3 128 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 SAP30LQ9HAJ7 183 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 PPIAL4AQ9Y536 164 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 LINC00312Q9Y6C7 94 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 LOC105371267A0A1B0GV96 52 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 LINC00473A8K010 186 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 NDUFA2O43678 99 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 GYPAP02724 150 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 THBDP07204 575 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 DAOP14920 347 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 NDUFB7P17568 137 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 FHITP49789 147 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 RAB11AP62491 216 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 GNB2P62879 340 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 MRPS11P82912 194 aaKnown RBP9.67□□□□□ -0.86
USF1-208ENST00000528768 C17orf58Q2M2W7 97 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 KHDC3LQ587J8 217 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 SOHLH1Q5JUK2 328 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 NCMAPQ5T1S8 102 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 NCR3LG1Q68D85 454 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 OR8G2PQ6IF36 304 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 TAF15Q92804 592 aaKnown RBP eCLIP9.67□□□□□ -0.86
USF1-208ENST00000528768 C5orf30Q96GV9 206 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 OR4C12Q96R67 309 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 IFI27L2Q9H2X8 130 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 ENY2Q9NPA8 101 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 CDC42EP3Q9UKI2 254 aa9.67□□□□□ -0.86
USF1-208ENST00000528768 FAM74A7A6NL05 159 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 B9A039 149 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 M0R036 132 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 NUPL2O15504 423 aaKnown RBP9.66□□□□□ -0.86
USF1-208ENST00000528768 WIPF1O43516 503 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 NDUFB3O43676 98 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 HSPB1P04792 205 aaKnown RBP9.66□□□□□ -0.86
USF1-208ENST00000528768 NFYBP25208 207 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 APOBEC3AP31941 199 aaPredicted RBP9.66□□□□□ -0.86
USF1-208ENST00000528768 CCL8P80075 99 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 RUNX1Q01196 453 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 RHEBQ15382 184 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 RTL8BQ17RB0 113 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 AARDQ4LEZ3 155 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 FAM74A3Q4VXF1 159 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 SPRNQ5BIV9 151 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 LRRC10Q5BKY1 277 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 ZNF506Q5JVG8 444 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 RBMS3Q6XE24 437 aaKnown RBP9.66□□□□□ -0.86
USF1-208ENST00000528768 MBD3L1Q8WWY6 194 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 ZNF251Q9BRH9 671 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 GGACTQ9BVM4 153 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 YAE1D1Q9NRH1 226 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 KCNIP2Q9NS61 270 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 SLC25A10Q9UBX3 287 aaPredicted RBP9.66□□□□□ -0.86
USF1-208ENST00000528768 DSCAMO60469 2012 aa9.66□□□□□ -0.86
USF1-208ENST00000528768 ABCA1O95477 2261 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 UBE2L5PA0A1B0GUS4 154 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 FAM157AC9JC47 383 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 TMEM178BH3BS89 294 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 GPR37O15354 613 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 TMPRSS2O15393 492 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 MPDU1O75352 247 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 NPBWR1P48145 328 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 ATP5J2P56134 94 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 HOXA4Q00056 320 aaPredicted RBP9.65□□□□□ -0.86
USF1-208ENST00000528768 FLI1Q01543 452 aaPredicted RBP9.65□□□□□ -0.86
USF1-208ENST00000528768 EFNB3Q15768 340 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 FAM201AQ5SY85 155 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 FAM122CQ6P4D5 195 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 SPSB3Q6PJ21 355 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 CENPVQ7Z7K6 275 aaPredicted RBP9.65□□□□□ -0.86
USF1-208ENST00000528768 ZNF429Q86V71 674 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 LYG1Q8N1E2 194 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 OR10G4Q8NGN3 311 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 IGFBPL1Q8WX77 278 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 WFIKKN1Q96NZ8 548 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 RPS10P5Q9NQ39 176 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 HEYLQ9NQ87 328 aaPredicted RBP9.65□□□□□ -0.86
USF1-208ENST00000528768 SLC39A9Q9NUM3 307 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 TMEM106BQ9NUM4 274 aa9.65□□□□□ -0.86
USF1-208ENST00000528768 RPUSD1Q9UJJ7 312 aaKnown RBP9.65□□□□□ -0.86
USF1-208ENST00000528768 A0A1B0GV50 99 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 CYB5BO43169 146 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 IFNA10P01566 189 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 APOA2P02652 100 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 FGF7P21781 194 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 ATP5IP56385 69 aaPredicted RBP9.64□□□□□ -0.87
USF1-208ENST00000528768 BRWD1-AS2P59051 145 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 OR2B8PP59922 312 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 RPL31P62899 125 aaKnown RBP9.64□□□□□ -0.87
USF1-208ENST00000528768 ARL16Q0P5N6 197 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 PDLIM3Q53GG5 364 aaPredicted RBP9.64□□□□□ -0.87
USF1-208ENST00000528768 RPL39P5Q59GN2 51 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 CT45A1Q5HYN5 189 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 ADAM5Q6NVV9 412 aa9.64□□□□□ -0.87
USF1-208ENST00000528768 C22orf34Q6ZV56 151 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms