RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SHOXO15266 292 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 IGLV2-23P01705 113 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 RPA2P15927 270 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 S100A1P23297 94 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TEX261Q6UWH6 196 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SELENOHQ8IZQ5 122 aaKnown RBP9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 OR5R1Q8NH85 324 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TMEM56Q96MV1 263 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 RNF5Q99942 180 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TMEM56-RWDD3S4R434 201 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 U3KQ87 197 aa9.7□□□□□ -0.86
TRAF3IP2-211ENST00000528599 DNAJC9-AS1A6NH13 148 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 CHST1O43916 411 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SIX6O95475 246 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 KRASP01116 189 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SLC25A4P12235 298 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 G6PCP35575 357 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 LGALS7P47929 136 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 CYCSP99999 105 aaKnown RBP9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 PSG5Q15238 335 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TMEM268Q5VZI3 342 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 ZNF418Q8TF45 676 aaPredicted RBP9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 R3HDM4Q96D70 268 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SEC22AQ96IW7 307 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 RHOVQ96L33 236 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 RBM14Q96PK6 669 aaKnown RBP9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 RAB18Q9NP72 206 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 COMMD9Q9P000 198 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 VPREB3Q9UKI3 123 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 POMT1Q9Y6A1 747 aa9.69□□□□□ -0.86
TRAF3IP2-211ENST00000528599 BTBD17A6NE02 478 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 OR2F2O95006 317 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 HRASP01112 189 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 IGKV1-5P01602 117 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 NQO2P16083 231 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 MMDQ15546 238 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 POU2AF1Q16633 256 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SSX9Q7RTT3 188 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 ZNF695Q8IW36 515 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 LGI3Q8N145 548 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TMEM86BQ8N661 226 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 LRTM2Q8N967 370 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 ZNF680Q8NEM1 530 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 NPBQ8NG41 125 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 RBPMSQ93062 196 aaKnown RBP9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 WDR89Q96FK6 387 aaPredicted RBP9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TSNAXQ99598 290 aaKnown RBP9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SLC25A33Q9BSK2 321 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 PITPNC1Q9UKF7 332 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 DNHD1Q96M86 4753 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 COL6A5A8TX70 2615 aa9.68□□□□□ -0.86
TRAF3IP2-211ENST00000528599 MARCH11A6NNE9 402 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 NCBP2LA6PVI3 153 aaKnown RBP9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 L7N2F9 121 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 RRHO14718 337 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 NBR2O15453 112 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SLC25A17O43808 307 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 NDUFA3O95167 84 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 CRYGBP07316 175 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SAA1P0DJI8 122 aaPredicted RBP9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 CXCL2P19875 107 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 HILS1P60008 231 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SRPXP78539 464 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 OPCMLQ14982 345 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 LYZL2Q7Z4W2 148 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SLC7A5P1Q8MH63 180 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SLC35G3Q8N808 338 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 Q8N9W7 124 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 COQ8AQ8NI60 647 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 IL22RA2Q969J5 263 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 FBXL15Q9H469 300 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TPSG1Q9NRR2 321 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TRAV14DV4A0A0A6YYC5 116 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 A0A0G2JRQ6 117 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 SPDEFO95238 335 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 IFNA7P01567 189 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 AMY1AP04745 511 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 IL6RP08887 468 aaPredicted RBP9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 P0C879 139 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 UBE2KP61086 200 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 IZUMO4Q1ZYL8 232 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 MRGPRG-AS1Q2M3A8 158 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 OR4A47Q6IF82 309 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 PUSL1Q8N0Z8 303 aaKnown RBP9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 FAM71E2Q8N5Q1 922 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 DMBX1Q8NFW5 382 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 OR8H1Q8NGG4 311 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 NMES1Q9C002 83 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TMEM140Q9NV12 185 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 METTL1Q9UBP6 276 aaKnown RBP9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 MOB4Q9Y3A3 225 aa9.67□□□□□ -0.86
TRAF3IP2-211ENST00000528599 TRAV3A0A0B4J244 114 aa9.66□□□□□ -0.86
TRAF3IP2-211ENST00000528599 CLDN34H7C241 214 aa9.66□□□□□ -0.86
TRAF3IP2-211ENST00000528599 FCN1O00602 326 aa9.66□□□□□ -0.86
TRAF3IP2-211ENST00000528599 GPR137BO60478 399 aa9.66□□□□□ -0.86
TRAF3IP2-211ENST00000528599 ADAP1O75689 374 aa9.66□□□□□ -0.86
TRAF3IP2-211ENST00000528599 MPC2O95563 127 aa9.66□□□□□ -0.86
TRAF3IP2-211ENST00000528599 S100A11P31949 105 aa9.66□□□□□ -0.86
TRAF3IP2-211ENST00000528599 AKR1C2P52895 323 aa9.66□□□□□ -0.86
TRAF3IP2-211ENST00000528599 ERVK-16P61578 105 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms