RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 OR4B1Q8NGF8 309 aa15.13■□□□□ 0.01
LTBP3-210ENST00000528516 FAM131CQ96AQ9 280 aa15.13■□□□□ 0.01
LTBP3-210ENST00000528516 DEPPQ9NTK1 212 aa15.13■□□□□ 0.01
LTBP3-210ENST00000528516 LAMTOR2Q9Y2Q5 125 aa15.13■□□□□ 0.01
LTBP3-210ENST00000528516 IGKV1-12A0A0C4DH73 117 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 A0A0G2JRQ6 117 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 IGKV1D-12P01611 117 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 NMSQ5H8A3 153 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 WNT10AQ9GZT5 417 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 PNRC2Q9NPJ4 139 aaKnown RBP15.12■□□□□ 0.01
LTBP3-210ENST00000528516 BET1LQ9NYM9 111 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 UQCR10Q9UDW1 63 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 RALYQ9UKM9 306 aaKnown RBP15.12■□□□□ 0.01
LTBP3-210ENST00000528516 CTXND1A0A1B0GTU2 59 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 FGF12P61328 243 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 CEACAM21Q3KPI0 293 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 WDR61Q9GZS3 305 aaKnown RBP15.12■□□□□ 0.01
LTBP3-210ENST00000528516 CCL25O15444 150 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 CELA3BP08861 270 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 PRB4P10163 310 aaPredicted RBP15.12■□□□□ 0.01
LTBP3-210ENST00000528516 FGFRL1Q8N441 504 aa15.12■□□□□ 0.01
LTBP3-210ENST00000528516 PSMG3Q9BT73 122 aaPredicted RBP15.12■□□□□ 0.01
LTBP3-210ENST00000528516 TRAV38-1A0A0B4J264 116 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 SSTR5P35346 364 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 KLF3P57682 345 aaPredicted RBP15.11■□□□□ 0.01
LTBP3-210ENST00000528516 MZT1Q08AG7 82 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 TIGITQ495A1 244 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 BLNKQ8WV28 456 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 HSD17B10Q99714 261 aaKnown RBP15.11■□□□□ 0.01
LTBP3-210ENST00000528516 MRPL18Q9H0U6 180 aaKnown RBP15.11■□□□□ 0.01
LTBP3-210ENST00000528516 MALRD1Q5VYJ5 2156 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 UCP1P25874 307 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 LRRC75BQ2VPJ9 315 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 SGK494Q96LW2 274 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 SPEGQ15772 3267 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 CAMPP49913 170 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 ODF3L1Q8IXM7 274 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 ZNF835Q9Y2P0 537 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 IGKV1-27A0A075B6S5 117 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 SNURFLB1AK76 121 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 HOXA4Q00056 320 aaPredicted RBP15.11■□□□□ 0.01
LTBP3-210ENST00000528516 BORCS7Q96B45 105 aa15.11■□□□□ 0.01
LTBP3-210ENST00000528516 PINLYPA6NC86 204 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 PLAUP00749 431 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 KIAA1644Q3SXP7 199 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 YLPM1P49750 1951 aaKnown RBP15.1■□□□□ 0.01
LTBP3-210ENST00000528516 IGHV3-72A0A0B4J1Y9 119 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 TRGV8A0A0C4DH27 118 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 DTX1Q86Y01 620 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 ZNF596Q8TC21 504 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 NAT8BQ9UHF3 227 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 PXMP4Q9Y6I8 212 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 C2CD3Q4AC94 2353 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 HBZP02008 142 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 PRB3Q04118 309 aaPredicted RBP15.1■□□□□ 0.01
LTBP3-210ENST00000528516 KLHDC1Q8N7A1 406 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 OR4P4Q8NGL7 312 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 OR10G8Q8NGN5 311 aa15.1■□□□□ 0.01
LTBP3-210ENST00000528516 SONP18583 2426 aaKnown RBP15.09■□□□□ 0.01
LTBP3-210ENST00000528516 TRAV17A0A0B4J275 112 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 ZG16O60844 167 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 TPTE2P1Q5T6R2 138 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 AGMATQ9BSE5 352 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 DERL1Q9BUN8 251 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 C11orf1Q9H5F2 150 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 TRGV10A0A0A0MS01 117 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 NAPSAO96009 420 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 ST6GALNAC3Q8NDV1 305 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 SSC4DQ8WTU2 575 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 H0Y980 276 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 APOA2P02652 100 aa15.09■□□□□ 0.01
LTBP3-210ENST00000528516 MRPL52Q86TS9 123 aaKnown RBP15.09■□□□□ 0.01
LTBP3-210ENST00000528516 NPIPB13A6NJU9 1138 aa15.08■□□□□ 0.01
LTBP3-210ENST00000528516 NPIPB4C9JG80 1138 aa15.08■□□□□ 0.01
LTBP3-210ENST00000528516 PRRG2O14669 202 aa15.08■□□□□ 0.01
LTBP3-210ENST00000528516 IGKV1D-33P01593 117 aa15.08■□□□□ 0.01
LTBP3-210ENST00000528516 IGKV1-33P01594 117 aa15.08■□□□□ 0.01
LTBP3-210ENST00000528516 COX7A1P24310 79 aa15.08■□□□□ 0.01
LTBP3-210ENST00000528516 IMMP1LQ96LU5 166 aa15.08■□□□□ 0.01
LTBP3-210ENST00000528516 SYNGR3O43761 229 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 CLDN14O95500 239 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 ORM2P19652 201 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 RBX1P62877 108 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 ZNF441Q8N8Z8 693 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 ZNRF1Q8ND25 227 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 ZDHHC16Q969W1 377 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 RNF115Q9Y4L5 304 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 KLF7O75840 302 aaPredicted RBP15.08■□□□□ 0
LTBP3-210ENST00000528516 COL6A3P12111 3177 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 TDGF1P13385 188 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 SELENOTP62341 195 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 TEX43Q6ZNM6 134 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 TCTEX1D1Q8N7M0 179 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 C10orf35Q96D05 121 aa15.08■□□□□ 0
LTBP3-210ENST00000528516 ZNF331Q9NQX6 463 aaPredicted RBP15.08■□□□□ 0
LTBP3-210ENST00000528516 TBL2Q9Y4P3 447 aaKnown RBP15.08■□□□□ 0
LTBP3-210ENST00000528516 SLC17A3O00476 420 aa15.07■□□□□ 0
LTBP3-210ENST00000528516 ATP5G3P48201 142 aa15.07■□□□□ 0
LTBP3-210ENST00000528516 BPIFB3P59826 476 aa15.07■□□□□ 0
LTBP3-210ENST00000528516 HLA-DRB5Q30154 266 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms