RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 WDYHV1Q96HA8 205 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 SNHG12Q9BXW3 62 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 PDE6DO43924 150 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 PSPNO60542 156 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 HBZP02008 142 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 GCH1P30793 250 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 CASP6P55212 293 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 ERVFC1-1P60608 527 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 LTC4SQ16873 150 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 ALKBH6Q3KRA9 238 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 TCF23Q7RTU1 214 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 NANOS1Q8WY41 292 aaKnown RBP10.45□□□□□ -0.74
CAPN1-208ENST00000527323 TTTY12Q9BZ98 90 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 NAGKQ9UJ70 344 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 SH3BGRL2Q9UJC5 107 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 RALYQ9UKM9 306 aaKnown RBP10.45□□□□□ -0.74
CAPN1-208ENST00000527323 F6UZH7 168 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 KITLGP21583 273 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 RPL29P47914 159 aaKnown RBP10.44□□□□□ -0.74
CAPN1-208ENST00000527323 ODF1Q14990 250 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 TBC1D28Q2M2D7 210 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 GCNT2Q8N0V5 402 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 TMEM251Q8N6I4 163 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 ABCA4P78363 2273 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 RAB29O14966 203 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 SOX15O60248 233 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 NUPR1O60356 82 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 TFF1P04155 84 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 CD1BP29016 333 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 SOX8P57073 446 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 HOXA4Q00056 320 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-208ENST00000527323 LRP11Q86VZ4 500 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 TPRX1Q8N7U7 411 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 PLPPR2Q96GM1 343 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 NEU1Q99519 415 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 ZDHHC11Q9H8X9 412 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 OBP2BQ9NPH6 170 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 GRIFINA4D1Z8 144 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 WNT9BO14905 357 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 CLDN14O95500 239 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 CD33P20138 364 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 ERVK11-1P61568 191 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 MRPL49Q13405 166 aaKnown RBP10.44□□□□□ -0.74
CAPN1-208ENST00000527323 PDLIM3Q53GG5 364 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-208ENST00000527323 ZNF826PQ6ZT77 177 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 ZNF114Q8NC26 417 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 C5orf30Q96GV9 206 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 BTF3L4Q96K17 158 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 FER1L6-AS2Q96M78 137 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 TBX15Q96SF7 602 aa10.44□□□□□ -0.74
CAPN1-208ENST00000527323 CELA3BP08861 270 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 CD82P27701 267 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 OR10J1P30954 320 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 ZNF146Q15072 292 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 SFRP2Q96HF1 295 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 PSG11Q9UQ72 335 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 PXMP4Q9Y6I8 212 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 CENPEQ02224 2701 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 MLNRO43193 412 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 THBS3P49746 956 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 RPL15P61313 204 aaKnown RBP10.43□□□□□ -0.74
CAPN1-208ENST00000527323 TAAR6Q96RI8 345 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 QTRT1Q9BXR0 403 aaKnown RBP10.43□□□□□ -0.74
CAPN1-208ENST00000527323 ABI3Q9P2A4 366 aa10.43□□□□□ -0.74
CAPN1-208ENST00000527323 POLR3KQ9Y2Y1 108 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-208ENST00000527323 OOEPA6NGQ2 149 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 BRWD1-AS2P59051 145 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 ZNF90Q03938 601 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 ZNF766Q5HY98 468 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 C1orf194Q5T5A4 169 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 CMTM2Q8TAZ6 248 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 BCL2L2Q92843 193 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-208ENST00000527323 FAM234AQ9H0X4 552 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 SP1P08047 785 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 P0C879 139 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 CYB5R2Q6BCY4 276 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 TOMM20LQ6UXN7 152 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 SLC25A40Q8TBP6 338 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 HEYLQ9NQ87 328 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-208ENST00000527323 KCNIP2Q9NS61 270 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 MARCH11A6NNE9 402 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.741e-5■■■■□ 19.7
CAPN1-208ENST00000527323 CD99P14209 185 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-208ENST00000527323 ADMP35318 185 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 OR10G8Q8NGN5 311 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 IMMP2LQ96T52 175 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 ELOVL5Q9NYP7 299 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 WDR83OSQ9Y284 106 aa10.42□□□□□ -0.74
CAPN1-208ENST00000527323 LINC00473A8K010 186 aa10.41□□□□□ -0.74
CAPN1-208ENST00000527323 C15orf62A8K5M9 175 aa10.41□□□□□ -0.74
CAPN1-208ENST00000527323 ARL14EPLP0DKL9 152 aa10.41□□□□□ -0.74
CAPN1-208ENST00000527323 SSTR5P35346 364 aa10.41□□□□□ -0.74
CAPN1-208ENST00000527323 UBE2NP61088 152 aaKnown RBP10.41□□□□□ -0.74
CAPN1-208ENST00000527323 FOXL1Q12952 345 aa10.41□□□□□ -0.74
CAPN1-208ENST00000527323 FBXW9Q5XUX1 488 aa10.41□□□□□ -0.74
CAPN1-208ENST00000527323 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
CAPN1-208ENST00000527323 RAXQ9Y2V3 346 aa10.41□□□□□ -0.74
CAPN1-208ENST00000527323 UTP20O75691 2785 aaKnown RBP10.41□□□□□ -0.74
CAPN1-208ENST00000527323 CFAP46Q8IYW2 2715 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms