RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 IGHV2-5P01817 119 aa13.29□□□□□ -0.28
SNRNP35-204ENST00000527158 IAPPP10997 89 aa13.29□□□□□ -0.28
SNRNP35-204ENST00000527158 C1orf229Q6ZS94 237 aaPredicted RBP13.29□□□□□ -0.28
SNRNP35-204ENST00000527158 DDB2Q92466 427 aa13.29□□□□□ -0.28
SNRNP35-204ENST00000527158 B4DEV8 164 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 AP4M1O00189 453 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 TXNL1O43396 289 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 SRP19P09132 144 aaKnown RBP13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 NQO2P16083 231 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 TMEM155Q4W5P6 130 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 FAM90A9PA6NNJ1 464 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 H3BP45 60 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 C19orf84I3L1E1 186 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 SLC35E3Q7Z769 313 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 FAM24BQ8N5W8 94 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 TMEM217Q8N7C4 229 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 C20orf24Q9BUV8 137 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 RBKSQ9H477 322 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 MIOXQ9UGB7 285 aa13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 PUS1Q9Y606 427 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 SMG1Q96Q15 3661 aaKnown RBP13.28□□□□□ -0.28
SNRNP35-204ENST00000527158 PPIHO43447 177 aaKnown RBP13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 SCAF4O95104 1147 aaKnown RBP13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 OR8U8P0C7N1 319 aa13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 ZNF295-AS1Q8N0V1 137 aa13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 OR8B3Q8NGG8 313 aa13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 ISOC2Q96AB3 205 aa13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 YPEL4Q96NS1 127 aa13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 OR8B2Q96RD0 313 aa13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 UBTD1Q9HAC8 227 aa13.27□□□□□ -0.28
SNRNP35-204ENST00000527158 ACACBO00763 2458 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 H3BQ15 152 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 LY6HO94772 140 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 FABP9Q0Z7S8 132 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 ZNF841Q6ZN19 808 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 ZNF383Q8NA42 475 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 TVP23CQ96ET8 276 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 RARRES2Q99969 163 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 NIPSNAP3BQ9BS92 247 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 PSMG3Q9BT73 122 aaPredicted RBP13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 USF3Q68DE3 2245 aa13.27□□□□□ -0.29
SNRNP35-204ENST00000527158 A0A1W2PPR1 153 aa13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 IGFBP2P18065 325 aa13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 DLX6P56179 175 aa13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 SSX9Q7RTT3 188 aa13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 C8orf31Q8N9H6 132 aa13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 OR4A16Q8NH70 328 aa13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 SCGB1C1Q8TD33 95 aa13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 PARD6GQ9BYG4 376 aaPredicted RBP13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 ABCA4P78363 2273 aa13.26□□□□□ -0.29
SNRNP35-204ENST00000527158 A0A1W2PPE2 198 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 TGOLN2O43493 480 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 TMEM267Q0VDI3 215 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 ICAM4Q14773 271 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 SPANXN5Q5MJ07 72 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 SLC25A24Q6NUK1 477 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 OR10X1Q8NGY0 326 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 CLDND2Q8NHS1 167 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 NEIL1Q96FI4 390 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 CIB3Q96Q77 187 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 CHODLQ9H9P2 273 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 YLPM1P49750 1951 aaKnown RBP13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 hCG_1809904A0A1W2PP81 198 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 A0A1W2PR64 198 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 A0A1W2PRV1 198 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 A6NNC1 897 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 J3QR06 171 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 ARG1P05089 322 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 CT45A6P0DMU7 189 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 CT45A5P0DMU8 189 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 CT45A7P0DMV0 189 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 IGHV1-8P0DP01 117 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 TAGLN2P37802 199 aaKnown RBP13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 HBG1P69891 147 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 HBG2P69892 147 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 PNRC1Q12796 327 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 RTL8BQ17RB0 113 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 ZNF833PQ6ZTB9 187 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 ZNF429Q86V71 674 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 TMPRSS5Q9H3S3 457 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 ZNRD1Q9P1U0 126 aa13.25□□□□□ -0.29
SNRNP35-204ENST00000527158 A0A087X0M5 115 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 A0A1B0GX30 115 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 HRASP01112 189 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 OR9G9P0C7N8 305 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 CCL20P78556 96 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 SERF2P84101 59 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 VKORC1L1Q8N0U8 176 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 LINC00311Q8N616 119 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 OR9G1Q8NH87 305 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 DTD1Q8TEA8 209 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 CEBPZOSA8MTT3 80 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 METTL15P1P0C7V9 234 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 ABHD12Q8N2K0 398 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 OR13D1Q8NGV5 346 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 ZNF596Q8TC21 504 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 TMEM186Q96B77 213 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 QTRT1Q9BXR0 403 aaKnown RBP13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 SLC35D1Q9NTN3 355 aa13.24□□□□□ -0.29
SNRNP35-204ENST00000527158 TMEM140Q9NV12 185 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms