RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 A0A1B0GW64 132 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 MSGN1A6NI15 193 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 FAM25AB3EWG3 89 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 FAM25CB3EWG5 89 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 FAM25GB3EWG6 89 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 JTBO76095 146 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 OR2A4O95047 310 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 IFNA6P05013 189 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 TAS2R20P59543 309 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 DEFB114Q30KQ6 69 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 IGSF11Q5DX21 431 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 TMEM69Q5SWH9 247 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 C10orf55Q5SWW7 151 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 IDO2Q6ZQW0 420 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 LINC00476Q8WZB0 136 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 TUBA4BQ9H853 241 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 EXTL2Q9UBQ6 330 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 KIAA1109Q2LD37 5005 aa10.72□□□□□ -0.69
CPSF1-201ENST00000526271 IGKV1D-8A0A087WSZ0 117 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 LINC00473A8K010 186 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 CNIH1O95406 144 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 HLA-AP01891 365 aaKnown RBP10.71□□□□□ -0.69
CPSF1-201ENST00000526271 CNIH2Q6PI25 160 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 LINC00299Q6ZSB3 139 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 CACNG8Q8WXS5 425 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 DIRAS2Q96HU8 199 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 HARBI1Q96MB7 349 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 CMSS1Q9BQ75 279 aaKnown RBP10.71□□□□□ -0.69
CPSF1-201ENST00000526271 ZC4H2Q9NQZ6 224 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 COA4Q9NYJ1 87 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 PTTG2Q9NZH5 202 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 MGAT4AQ9UM21 535 aa10.71□□□□□ -0.69
CPSF1-201ENST00000526271 TMEM235A6NFC5 223 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 TRDCB7Z8K6 153 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 PPP5D1E7EU14 171 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 E7EUB6 86 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 SSX5O60225 188 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 GSTT2P0CG29 244 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 GSTT2BP0CG30 244 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 CD40LGP29965 261 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 TALDO1P37837 337 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 RHOGP84095 191 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 PRSS8Q16651 343 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 RPEL1Q2QD12 228 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 CCDC190Q86UF4 302 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 GTSCR1Q86UQ5 136 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.7□□□□□ -0.7
CPSF1-201ENST00000526271 SRSF12Q8WXF0 261 aaKnown RBP10.7□□□□□ -0.7
CPSF1-201ENST00000526271 MAFIPQ8WZ33 124 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 WDR89Q96FK6 387 aaPredicted RBP10.7□□□□□ -0.7
CPSF1-201ENST00000526271 USMG5Q96IX5 58 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 ABHD1Q96SE0 405 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 CABLES2Q9BTV7 478 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 OR2D2Q9H210 308 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 SRD5A3Q9H8P0 318 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 C12orf4Q9NQ89 552 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 RABL2AQ9UBK7 228 aaPredicted RBP10.7□□□□□ -0.7
CPSF1-201ENST00000526271 ZNF221Q9UK13 617 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 RABL2BQ9UNT1 228 aa10.7□□□□□ -0.7
CPSF1-201ENST00000526271 DNAH6Q9C0G6 4158 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 TRBV6-7A0A0A0MS04 114 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.69□□□□□ -0.7
CPSF1-201ENST00000526271 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 APOA2P02652 100 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 OR9G9P0C7N8 305 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 PTHLHP12272 177 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 AADACP22760 399 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 DTYMKP23919 212 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 S100A5P33763 92 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 ETV6P41212 452 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 LGALS7P47929 136 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 ARFRP1Q13795 201 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 EXOSC2Q13868 293 aaKnown RBP10.69□□□□□ -0.7
CPSF1-201ENST00000526271 Q6ZS49 121 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 C15orf40Q8WUR7 153 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 TMEM68Q96MH6 324 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 OVOL2Q9BRP0 275 aa10.69□□□□□ -0.7
CPSF1-201ENST00000526271 MRPS7Q9Y2R9 242 aaKnown RBP10.69□□□□□ -0.7
CPSF1-201ENST00000526271 FABP12A6NFH5 140 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 OR11H12B2RN74 326 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 SULT1C2O00338 296 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 CTDSPLO15194 276 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 FABP7O15540 132 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 PTBP1P26599 531 aaKnown RBP eCLIP10.68□□□□□ -0.7
CPSF1-201ENST00000526271 DUTP33316 252 aaKnown RBP10.68□□□□□ -0.7
CPSF1-201ENST00000526271 PRSS3P35030 304 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 KIR2DS2P43631 304 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 GNG2P59768 71 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 UBE2KP61086 200 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 MRPS15P82914 257 aaKnown RBP10.68□□□□□ -0.7
CPSF1-201ENST00000526271 TAGLNQ01995 201 aaKnown RBP10.68□□□□□ -0.7
CPSF1-201ENST00000526271 OR2K2Q8NGT1 345 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 GPX8Q8TED1 209 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 SNAPC3Q92966 411 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 CCDC140Q96MF4 163 aa10.68□□□□□ -0.7
CPSF1-201ENST00000526271 ZNF430Q9H8G1 570 aaPredicted RBP10.68□□□□□ -0.7
CPSF1-201ENST00000526271 TEX22C9J3V5 150 aa10.67□□□□□ -0.7
CPSF1-201ENST00000526271 SHOXO15266 292 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms