RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 DNAJC13O75165 2243 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 NR2C2APQ86WQ0 139 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 TDHQ8IZJ6 230 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 ZNF479Q96JC4 524 aa11.73□□□□□ -0.53
LRRK1-202ENST00000525284 IGHV1OR21-1A0A087WYE8 117 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 LINC00587B1AMM8 73 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 CA7P43166 264 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 LINC00158P58513 81 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 SAMD5Q5TGI4 173 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 PCSK4Q6UW60 755 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 LINC01565O15544 149 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 DXOO77932 396 aaKnown RBP11.72□□□□□ -0.53
LRRK1-202ENST00000525284 LINC01555Q8NAE3 123 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 LHX9Q9NQ69 397 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 IDI2-AS1Q9NZ38 188 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 A0A1B0GUT8 65 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 TUBGCP6Q96RT7 1819 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 FBXW9Q5XUX1 488 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 NAA38Q9BRA0 125 aaKnown RBP11.72□□□□□ -0.53
LRRK1-202ENST00000525284 CEACAM21Q3KPI0 293 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 VAX1Q5SQQ9 334 aa11.72□□□□□ -0.53
LRRK1-202ENST00000525284 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 DANCRP0C864 163 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 PLNP26678 52 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 IFI27P40305 119 aaPredicted RBP11.71□□□□□ -0.53
LRRK1-202ENST00000525284 OR4X2Q8NGF9 303 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 ITLN1Q8WWA0 313 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 CLEC7AQ9BXN2 247 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 GZMBP10144 247 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 CCL3P10147 92 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 FGF12P61328 243 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 RSPO3Q9BXY4 272 aaPredicted RBP11.71□□□□□ -0.53
LRRK1-202ENST00000525284 JPT2Q9H910 190 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 COL18A1P39060 1754 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 EPDR1Q9UM22 224 aa11.71□□□□□ -0.53
LRRK1-202ENST00000525284 TRIP6Q15654 476 aaKnown RBP11.71□□□□□ -0.54
LRRK1-202ENST00000525284 GTSF1LQ9H1H1 148 aa11.71□□□□□ -0.54
LRRK1-202ENST00000525284 TMEM30AQ9NV96 361 aa11.71□□□□□ -0.54
LRRK1-202ENST00000525284 CGAP01215 116 aa11.71□□□□□ -0.54
LRRK1-202ENST00000525284 ORMDL3Q8N138 153 aa11.71□□□□□ -0.54
LRRK1-202ENST00000525284 KLHDC2Q9Y2U9 406 aa11.71□□□□□ -0.54
LRRK1-202ENST00000525284 COQ2Q96H96 371 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 VGLL1Q99990 258 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 ERG28Q9UKR5 140 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 SPAG17Q6Q759 2223 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 NPIPB11E5RHQ5 1161 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 KIAA0040Q15053 153 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 TEX45Q8NA69 505 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 ZNF124Q15973 351 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 C19orf48Q6RUI8 117 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 SHISA5Q8N114 240 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 TMEM86BQ8N661 226 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 KCNE1BA0A087WTH5 132 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 SCO2A0A1W2PP80 73 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 APOBEC4Q8WW27 367 aaKnown RBP11.7□□□□□ -0.54
LRRK1-202ENST00000525284 GPR132Q9UNW8 380 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 COL22A1Q8NFW1 1626 aaPredicted RBP11.7□□□□□ -0.54
LRRK1-202ENST00000525284 ARID1AO14497 2285 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 CELA2BP08218 269 aaPredicted RBP11.7□□□□□ -0.54
LRRK1-202ENST00000525284 UCP2P55851 309 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 ZNF385AQ96PM9 386 aaKnown RBP11.7□□□□□ -0.54
LRRK1-202ENST00000525284 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
LRRK1-202ENST00000525284 NRN1Q9NPD7 142 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 DOCK2Q92608 1830 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 ARAP2Q8WZ64 1704 aa11.7□□□□□ -0.54
LRRK1-202ENST00000525284 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
LRRK1-202ENST00000525284 C19orf24Q9BVV8 132 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 MPTX1A8MV57 137 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 IGLV3-27P01718 113 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 BGLAPP02818 100 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 P2RY6Q15077 328 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 CYP2G1PQ6ZSU1 146 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 SDF2L1Q9HCN8 221 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 G6PC2Q9NQR9 355 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 TRGV3P03979 118 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 IGFBP6P24592 240 aaPredicted RBP11.69□□□□□ -0.54
LRRK1-202ENST00000525284 NANOS3P60323 173 aaKnown RBP11.69□□□□□ -0.54
LRRK1-202ENST00000525284 NPCDR1Q9BY65 106 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 TCF19Q9Y242 345 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 A0A1W2PPC1 479 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 A0A1W2PRS3 328 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 DPM2O94777 84 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
LRRK1-202ENST00000525284 OR11H4Q8NGC9 324 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 CHTOPQ9Y3Y2 248 aaKnown RBP11.69□□□□□ -0.54
LRRK1-202ENST00000525284 IGHV3OR16-8A0A075B7F1 116 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 PPIAL4CA0A0B4J2A2 164 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 SERF1AO75920 110 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 PPIAL4GP0DN37 164 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 ZPLD1Q8TCW7 415 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
LRRK1-202ENST00000525284 LRP5O75197 1615 aa11.68□□□□□ -0.54
LRRK1-202ENST00000525284 A0A1W2PQD3 144 aa11.68□□□□□ -0.54
LRRK1-202ENST00000525284 ESDP10768 282 aa11.68□□□□□ -0.54
LRRK1-202ENST00000525284 CTGFP29279 349 aa11.68□□□□□ -0.54
LRRK1-202ENST00000525284 LRTM2Q8N967 370 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms