RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ATAD3CQ5T2N8 411 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 PRSS48Q7RTY5 328 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 GPHB5Q86YW7 130 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 APRG1Q8IVJ8 170 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 OR13C2Q8NGS9 318 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 KCNG3Q8TAE7 436 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 FAM81AQ8TBF8 368 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 AGR3Q8TD06 166 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 GPX7Q96SL4 187 aaPredicted RBP4.63□□□□□ -1.67
NEDD8-203ENST00000524927 PBOV1Q9GZY1 135 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 RIMS3Q9UJD0 308 aa4.63□□□□□ -1.67
NEDD8-203ENST00000524927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.62□□□□□ -1.67
NEDD8-203ENST00000524927 RNF222A6NCQ9 220 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 LANCL1O43813 399 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 PLIN3O60664 434 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 IL6P05231 212 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 SPART-AS1P0CW21 52 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 C8orf88P0DMB2 117 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 PLTPP55058 493 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF85Q03923 595 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 ZBED5Q49AG3 693 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 NHLRC3Q5JS37 347 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 SPIN3Q5JUX0 258 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF684Q5T5D7 378 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 LINC00242Q5T6M2 205 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 Q6ZSA8 131 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 BBS1Q8NFJ9 593 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 OR5T1Q8NG75 326 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 COQ2Q96H96 371 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 AMBNQ9NP70 447 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 SLC35D1Q9NTN3 355 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 MTCH1Q9NZJ7 389 aa4.62□□□□□ -1.67
NEDD8-203ENST00000524927 SMIM23A6NLE4 172 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 PANO1I0J062 215 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 FCN1O00602 326 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 MRPS14O60783 128 aaKnown RBP4.61□□□□□ -1.67
NEDD8-203ENST00000524927 GGCTO75223 188 aaKnown RBP4.61□□□□□ -1.67
NEDD8-203ENST00000524927 DNAH10OSP0CZ25 163 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 IL12AP29459 219 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 RPS27P42677 84 aaKnown RBP4.61□□□□□ -1.67
NEDD8-203ENST00000524927 DEFA5Q01523 94 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 PRKCDQ05655 676 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 MED21Q13503 144 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 OXA1LQ15070 435 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 PTGES3Q15185 160 aaKnown RBP4.61□□□□□ -1.67
NEDD8-203ENST00000524927 LTC4SQ16873 150 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 SLC25A48Q6ZT89 311 aaKnown RBP4.61□□□□□ -1.67
NEDD8-203ENST00000524927 NRMQ8IXM6 262 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 Q8IYB0 196 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 RFESDQ8TAC1 157 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 FBXL15Q9H469 300 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 NCOR1P1Q9H4R4 102 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 MRPL27Q9P0M9 148 aaKnown RBP4.61□□□□□ -1.67
NEDD8-203ENST00000524927 TBC1D24Q9ULP9 559 aa4.61□□□□□ -1.67
NEDD8-203ENST00000524927 A0A087WUU8 490 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 FBLL1A6NHQ2 334 aaKnown RBP4.6□□□□□ -1.67
NEDD8-203ENST00000524927 SIRPB1O00241 398 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 NRASP01111 189 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 GLP1RP43220 463 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 LGALS7P47929 136 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 RIPPLY1Q0D2K3 151 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 PLGLAQ15195 96 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 UBE2V2Q15819 145 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 Q3ZCU0 254 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 LAMTOR1Q6IAA8 161 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 Q6ZRU5 148 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 RPRD1BQ9NQG5 326 aaKnown RBP4.6□□□□□ -1.67
NEDD8-203ENST00000524927 SLC2A9Q9NRM0 540 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF586Q9NXT0 402 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 RDH8Q9NYR8 311 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 DNAJC27Q9NZQ0 273 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 CD300AQ9UGN4 299 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 ZNF230Q9UIE0 474 aaPredicted RBP4.6□□□□□ -1.67
NEDD8-203ENST00000524927 BLOC1S6Q9UL45 172 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 SAMD4AQ9UPU9 718 aaKnown RBP4.6□□□□□ -1.67
NEDD8-203ENST00000524927 IER3IP1Q9Y5U9 82 aa4.6□□□□□ -1.67
NEDD8-203ENST00000524927 IGHV3OR16-12A0A075B7B8 117 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 DHRS12A0PJE2 317 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 M0QX08 132 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 SDHDO14521 159 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 CDC42EP2O14613 210 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 ENTPD6O75354 484 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 OR2H2O95918 312 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 REG1AP05451 166 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 GIG44P09565 113 aaPredicted RBP4.59□□□□□ -1.67
NEDD8-203ENST00000524927 PSKH1P11801 424 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 HNRNPA3P51991 378 aaKnown RBP4.59□□□□□ -1.67
NEDD8-203ENST00000524927 TMEM69Q5SWH9 247 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 CLEC19AQ6UXS0 136 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 SSX7Q7RTT5 188 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 OR52M1Q8NGK5 317 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 LZICQ8WZA0 190 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 NMNAT3Q96T66 252 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 SORT1Q99523 831 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 TPPP3Q9BW30 176 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 EXOSC4Q9NPD3 245 aaKnown RBP4.59□□□□□ -1.67
NEDD8-203ENST00000524927 TMEM14BQ9NUH8 114 aa4.59□□□□□ -1.67
NEDD8-203ENST00000524927 TRBV7-9A0A0J9YWB2 115 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 FAM223BA6NKX1 122 aa4.58□□□□□ -1.68
NEDD8-203ENST00000524927 PPP5D1E7EU14 171 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms