RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 C20orf144Q9BQM9 153 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 MAP1LC3CQ9BXW4 147 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 TRIM4Q9C037 500 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 SRRQ9GZT4 340 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 AICDAQ9GZX7 198 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 OR51I1Q9H343 314 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 CXorf21Q9HAI6 301 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 NMNAT1Q9HAN9 279 aaPredicted RBP2.06□□□□□ -2.08
SKP1-212ENST00000523966 FAM60AQ9NP50 221 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 PRTFDC1Q9NRG1 225 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 C14orf105Q9NVL8 296 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 USE1Q9NZ43 259 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 ANXA10Q9UJ72 324 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 NXT1Q9UKK6 140 aaKnown RBP2.06□□□□□ -2.08
SKP1-212ENST00000523966 POFUT2Q9Y2G5 429 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 HSPE1-MOB4S4R3N1 261 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 V9GYQ6 96 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 EML5Q05BV3 1969 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 ACACAQ13085 2346 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 XIRP2A4UGR9 3374 aa2.06□□□□□ -2.08
SKP1-212ENST00000523966 SPTBN2O15020 2390 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 MUC6Q6W4X9 2439 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 GVINP1Q7Z2Y8 2422 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 A0A087WXM4 84 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 LOC100130705A0A1B0GUX0 176 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 SMIM31A0A1B0GVY4 71 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 RAB19A4D1S5 217 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 TRAPPC13A5PLN9 417 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 IZUMO1RA6ND01 250 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 ZNF860A6NHJ4 632 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 C4orf51C9J302 202 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 C9J4A7 227 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 D6RAR5 112 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 hCG_2039718K7EN88 272 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 FAAHO00519 579 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 ACOX3O15254 700 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 MPZL2O60487 215 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 MRPS14O60783 128 aaKnown RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 CBR3O75828 277 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 DHRS3O75911 302 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 OR5F1O95221 314 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 GADD45GO95257 159 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 LDOC1O95751 146 aaPredicted RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 STATHP02808 62 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 RLN2P04090 185 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 OR5AC1P0C628 307 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 GIMD1P0DJR0 217 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 SLC6A1P30531 599 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 RPL5P46777 297 aaKnown RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 OR1E2P47887 323 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 GTF2A1P52655 376 aaPredicted RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 CXCR4P61073 352 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 COPZ1P61923 177 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 CCL7P80098 99 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 EIF3IQ13347 325 aaKnown RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 DYNC1I2Q13409 638 aaKnown RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 DEFB110Q30KQ9 67 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 LIN52Q52LA3 116 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 TRMT12Q53H54 448 aaKnown RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 UBE2NLQ5JXB2 153 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 RBM48Q5RL73 367 aaKnown RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 C6orf52Q5T4I8 152 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 FAHD1Q6P587 224 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 ZNF550Q7Z398 422 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 C10orf111Q8N326 155 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 DRAXINQ8NBI3 349 aaPredicted RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 MORN4Q8NDC4 146 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 PLPP5Q8NEB5 264 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 OR52R1Q8NGF1 315 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 OR8A1Q8NGG7 326 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 OR4D6Q8NGJ1 314 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 OR8K3Q8NH51 312 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 RAB8BQ92930 207 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 RMND5BQ96G75 393 aaPredicted RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 CNBD2Q96M20 576 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 OR7D2Q96RA2 312 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 SDF2Q99470 211 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 ANGPTL4Q9BY76 406 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 MRPS26Q9BYN8 205 aaKnown RBP2.05□□□□□ -2.08
SKP1-212ENST00000523966 PRRG3Q9BZD7 231 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 GABARAPL1Q9H0R8 117 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 PRORYQ9H606 182 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 WDR54Q9H977 334 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 C12orf4Q9NQ89 552 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 UBQLN4Q9NRR5 601 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 ACER3Q9NUN7 267 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 SCN3BQ9NY72 215 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 MAT2BQ9NZL9 334 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 DNAJC27Q9NZQ0 273 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 SLC35A3Q9Y2D2 325 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 TPRKBQ9Y3C4 175 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 DSPPQ9NZW4 1301 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 COL6A3P12111 3177 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 TMEM131Q92545 1883 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 HEATR5AQ86XA9 2040 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 CEP250Q9BV73 2442 aa2.05□□□□□ -2.08
SKP1-212ENST00000523966 WDR87Q6ZQQ6 2873 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 EYSQ5T1H1 3165 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 IRGMA1A4Y4 181 aa2.04□□□□□ -2.08
SKP1-212ENST00000523966 EFCAB10A6NFE3 127 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms