RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 FER1L6-AS1Q8NA97 138 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 OR2AE1Q8NHA4 323 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 OCC1Q8TAD7 63 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 PIGCQ92535 297 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 TAAR6Q96RI8 345 aa7.03□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF331Q9NQX6 463 aaPredicted RBP7.03□□□□□ -1.28
CSMD1-213ENST00000523488 SDK2Q58EX2 2172 aa7.02□□□□□ -1.28
CSMD1-213ENST00000523488 MUC21A0A0G2JKD1 596 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 MUC21A0A140T8X8 626 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 CD5LO43866 347 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 HAND1O96004 215 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 DEFA4P12838 97 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 RPL24P83731 157 aaKnown RBP7.02□□□□□ -1.29
CSMD1-213ENST00000523488 TGFBR3Q03167 851 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 MUC21Q5SSG8 566 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 WDR31Q8NA23 367 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 NEUROG1Q92886 237 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 IGKV1D-13A0A0B4J2D9 117 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 SHISA8B8ZZ34 492 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 FNDC10F2Z333 226 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 IGKV1-13P0DP09 117 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 IGLL1P15814 213 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 PLA2G5P39877 138 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 SELENOVP59797 346 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 BVES-AS1Q5T3Y7 98 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 C9orf135Q5VTT2 229 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 RNASEKQ6P5S7 137 aaKnown RBP7.02□□□□□ -1.29
CSMD1-213ENST00000523488 OR1N2Q8NGR9 330 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 SLC25A40Q8TBP6 338 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 TMEM265A0A087WTH1 108 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 SYNGR3O43761 229 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 USF1P22415 310 aaPredicted RBP7.02□□□□□ -1.29
CSMD1-213ENST00000523488 PLP1P60201 277 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 UBE2G1P62253 170 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 FOXI2Q6ZQN5 318 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 FADS6Q8N9I5 356 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 RDH5Q92781 318 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 SCRT2Q9NQ03 307 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 PPP1R3CQ9UQK1 317 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 ATP23Q9Y6H3 246 aa7.02□□□□□ -1.29
CSMD1-213ENST00000523488 RALGAPA1Q6GYQ0 2036 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 MED12Q93074 2177 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 J3QW42 95 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 EDDM3BP56851 147 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 SRSF6Q13247 344 aaKnown RBP7.01□□□□□ -1.29
CSMD1-213ENST00000523488 SPATA12Q7Z6I5 190 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 OR10G3Q8NGC4 313 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 OR1B1Q8NGR6 318 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 COMMD5Q9GZQ3 224 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 TIMM8BQ9Y5J9 83 aaPredicted RBP7.01□□□□□ -1.29
CSMD1-213ENST00000523488 HTTP42858 3142 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 UNC80Q8N2C7 3258 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 OTOL1A6NHN0 477 aaPredicted RBP7.01□□□□□ -1.29
CSMD1-213ENST00000523488 TSTD1Q8NFU3 115 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 C1orf159Q96HA4 380 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 RCHY1Q96PM5 261 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 BDP1A6H8Y1 2624 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 TRAV38-1A0A0B4J264 116 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 hCG_38984A0A1B0GV85 526 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 C22orf46C9J442 243 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 APCSP02743 223 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 FAM231DQ6ZW35 169 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 PIFOQ8TCI5 191 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 TSKUQ8WUA8 353 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 IGF2BP2-AS1Q96M15 143 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 OSTCQ9NRP0 149 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 FER1L5A0AVI2 2057 aa7.01□□□□□ -1.29
CSMD1-213ENST00000523488 SPTAN1Q13813 2472 aaKnown RBP7.01□□□□□ -1.29
CSMD1-213ENST00000523488 A0A1W2PNR3 127 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 IGLV2-8P01709 118 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 STAG3L2P0CL84 134 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 STAG3L3P0CL85 134 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 GPR6P46095 362 aaPredicted RBP7□□□□□ -1.29
CSMD1-213ENST00000523488 SMAGPQ0VAQ4 97 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 TMEM95Q3KNT9 176 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 NRN1LQ496H8 165 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 FAM69BQ5VUD6 431 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 ABCA7Q8IZY2 2146 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 FNDC4Q9H6D8 234 aaPredicted RBP7□□□□□ -1.29
CSMD1-213ENST00000523488 C7orf69Q9H7B7 122 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 MTCH1Q9NZJ7 389 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 KLRF1Q9NZS2 232 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 SCO2A0A1W2PP80 73 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 C21orf140B9A014 251 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 H0Y8G0 127 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 HLA-DQA1P01909 254 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 LPAL2Q16609 132 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 SHISA6Q6ZSJ9 500 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 Q6ZSR6 202 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 SARAFQ96BY9 339 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 ABI3Q9P2A4 366 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 KIR2DS5A0A0G2JLQ3 304 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 A0A0G2JNG1 304 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 A0A1B0GXF2 115 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 OR4C46A6NHA9 309 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 KIR2DS3K7RE56 304 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 YPEL5P62699 121 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 TFF3Q07654 80 aa7□□□□□ -1.29
CSMD1-213ENST00000523488 KIR2DS5Q14953 304 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms