RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 TXNL4BQ9NX01 149 aaKnown RBP0.48□□□□□ -2.33
CLK4-213ENST00000523013 HHLA2Q9UM44 414 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 GUCA1BQ9UMX6 200 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 KLK5Q9Y337 293 aaPredicted RBP0.48□□□□□ -2.33
CLK4-213ENST00000523013 FIS1Q9Y3D6 152 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 KIF21BO75037 1637 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 PCF11O94913 1555 aaKnown RBP0.48□□□□□ -2.33
CLK4-213ENST00000523013 ABCC8Q09428 1581 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 CFAP74Q9C0B2 1584 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 ERICH3Q5RHP9 1530 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 DISP1Q96F81 1524 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 FAM135AQ9P2D6 1515 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 CCDC88BA6NC98 1476 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 GOLGA3Q08378 1498 aa0.48□□□□□ -2.33
CLK4-213ENST00000523013 INTS1Q8N201 2190 aaKnown RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 POLR1AO95602 1720 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 WDR90Q96KV7 1748 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 GCC2Q8IWJ2 1684 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ITSN2Q9NZM3 1697 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 EVC2Q86UK5 1308 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 PTPRBP23467 1997 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SHROOM2Q13796 1616 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ABCA5Q8WWZ7 1642 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ZFHX2Q9C0A1 2572 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 A0A087WUJ7 227 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 A0A087WUU8 490 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 IGHV3-15A0A0B4J1V0 119 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 IGHV3-73A0A0B4J1V6 119 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 A0A1B0GVG6 124 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 MDFIC2A0A1B0GVS7 189 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 LINC00862A6NCI5 91 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SMIM23A6NLE4 172 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 A8MUN3 132 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 DISC1C4P0D8 188 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 EEF1E1-BLOC1S5C9J1V9 151 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 C9JCJ5 164 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 INMT-MINDY4F8WBC2 141 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 GOLGA6L19H0YKK7 550 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 H3BPC8 53 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SLC17A3O00476 420 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 RPP14O95059 124 aaKnown RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 NDUFB2O95178 105 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 LYPLA2O95372 231 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 KRT75O95678 551 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 HLA-DQB2P05538 268 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 OR5G3P0C626 314 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ZNF705DP0CH99 300 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 ZNF705BP0CI00 300 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 FGF6P10767 208 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ESDP10768 282 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 MYL12AP19105 171 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 NPPCP23582 126 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 CCR7P32248 378 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 MAP2K4P45985 399 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SLCO1A2P46721 670 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SERPINB10P48595 397 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 MARCKSL1P49006 195 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 RBM11P57052 281 aaKnown RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 TMEM33P57088 247 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 TAS2R45P59539 299 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 AP3S2P59780 193 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 RANP62826 216 aaKnown RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 CCL7P80098 99 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 HOXC5Q00444 222 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 RSU1Q15404 277 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 UAP1Q16222 522 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 ACOT6Q3I5F7 207 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 ACSM3Q53FZ2 586 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 TNFAIP8L3Q5GJ75 292 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 C8orf74Q6P047 294 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 AMTNQ6UX39 209 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 HIST2H3AQ71DI3 136 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SPATA12Q7Z6I5 190 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 LRRC34Q8IZ02 419 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 C1orf158Q8N1D5 194 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 LRRC25Q8N386 305 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 DEFB125Q8N687 156 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 NATD1Q8N6N6 113 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 PACRGLQ8N7B6 248 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 DAND5Q8N907 189 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 CCDC112Q8NEF3 446 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 OR11H1Q8NG94 326 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 OR2T4Q8NH00 348 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 OR2T27Q8NH04 317 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 FNDC9Q8TBE3 224 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SMCR5Q8TEV8 140 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ANKRD7Q92527 254 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 MS4A6EQ96DS6 147 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 GNPNAT1Q96EK6 184 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 IMP4Q96G21 291 aaKnown RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 DIRAS2Q96HU8 199 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ANKRD36BP1Q96IX9 119 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SLC35G5Q96KT7 338 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 CCDC42Q96M95 316 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 CCL13Q99616 98 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 OR51V1Q9H2C8 321 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 OR51I2Q9H344 312 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 NDUFB11Q9NX14 153 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 EMC3Q9P0I2 261 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms