RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 OR3A1P47881 315 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 RBM39Q14498 530 aaKnown RBP5□□□□□ -1.61
SDCBP-210ENST00000522843 IL13RA2Q14627 380 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 ZNF146Q15072 292 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 RSU1Q15404 277 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 GRK1Q15835 563 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 MPV17LQ2QL34 196 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 MOGAT2Q3SYC2 334 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 SLC22A6Q4U2R8 563 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 TRIQKQ629K1 86 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 SIGIRRQ6IA17 410 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 Q6ZS49 121 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 NRARPQ7Z6K4 114 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 TGIF2LXQ8IUE1 241 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 SNX29P2Q8IUI4 249 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 TOMM5Q8N4H5 51 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 LEAP2Q969E1 77 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 TOMM40LQ969M1 308 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 RPEQ96AT9 228 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 RAB3CQ96E17 227 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 MARVELD1Q9BSK0 173 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 SELENOIQ9C0D9 397 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 PLEKHA2Q9HB19 425 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 RCC2Q9P258 522 aaKnown RBP5□□□□□ -1.61
SDCBP-210ENST00000522843 KLK11Q9UBX7 282 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 VSIG4Q9Y279 399 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 MYCBP2O75592 4640 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 TRBV6-6A0A0A6YYG2 114 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 IGHV3-72A0A0B4J1Y9 119 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 A0A1W2PP11 408 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 LINC01619G3V211 115 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 G3V318 75 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 TOR1AO14656 332 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 SOCS1O15524 211 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 SPRY2O43597 315 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 CRTAPO75718 401 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-210ENST00000522843 CYB5AP00167 134 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 IGHV3-7P01780 117 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 IGF1P05019 195 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 CD3GP09693 182 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 OR8U9P0C7N5 309 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 DTYMKP23919 212 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 P2RX3P56373 397 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 RBM11P57052 281 aaKnown RBP4.99□□□□□ -1.61
SDCBP-210ENST00000522843 ACTBP60709 375 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 PAX5Q02548 391 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 C17orf58Q2M2W7 97 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 TRIM16LQ309B1 348 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 LGALS9CQ6DKI2 356 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 OR52W1Q6IF63 320 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 TMEM65Q6PI78 240 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 CEMP1Q6PRD7 247 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-210ENST00000522843 IL34Q6ZMJ4 242 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 SLC25A26Q70HW3 274 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 TRAPPC6BQ86SZ2 158 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 GAPTQ8N292 157 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 PRSS3P2Q8NHM4 247 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 CORO2AQ92828 525 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 CREB3L1Q96BA8 519 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 PPP1R14BQ96C90 147 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 FYTTD1Q96QD9 318 aaKnown RBP4.99□□□□□ -1.61
SDCBP-210ENST00000522843 GON7Q9BXV9 100 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 PECRQ9BY49 303 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 TOLLIPQ9H0E2 274 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 RIMS4Q9H426 269 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-210ENST00000522843 BANF2Q9H503 90 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 SPACA1Q9HBV2 294 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 HRASLSQ9HDD0 168 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 ST3GAL6Q9Y274 331 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 POLDIP2Q9Y2S7 368 aa4.99□□□□□ -1.61
SDCBP-210ENST00000522843 FAM240BA0A1B0GVZ2 78 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 IZUMO1RA6ND01 250 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 CXorf65A6NEN9 183 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 NUPR2A6NF83 97 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 NCBP2LA6PVI3 153 aaKnown RBP4.98□□□□□ -1.61
SDCBP-210ENST00000522843 J3QR06 171 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 SSX5O60225 188 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 PDCD6O75340 191 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 HAND1O96004 215 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 CLEC3BP05452 202 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 ZNF735P0CB33 412 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 CGB3P0DN86 165 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 CGB7P0DN87 165 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 GNB3P16520 340 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 VDAC1P21796 283 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 GABRR1P24046 479 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 ERP29P30040 261 aaKnown RBP4.98□□□□□ -1.61
SDCBP-210ENST00000522843 BLVRBP30043 206 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-210ENST00000522843 BTCP35070 178 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 RCVRNP35243 200 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 FAUP35544 74 aaKnown RBP4.98□□□□□ -1.61
SDCBP-210ENST00000522843 GLIPR1P48060 266 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 NPBWR2P48146 333 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 RAB9AP51151 201 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 PRRX1P54821 245 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 TAS2R19P59542 299 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 MEF2DQ14814 521 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 CDK10Q15131 360 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 SPIN3Q5JUX0 258 aa4.98□□□□□ -1.61
SDCBP-210ENST00000522843 Q6P435 159 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms