RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SPTY2D1-AS1A0A0U1RR47 76 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM235A6NFC5 223 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 F6UZH7 168 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 F8WDY8 70 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 M0R036 132 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 AGPAT2O15120 278 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 CDC40O60508 579 aaKnown RBP eCLIP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 SCRG1O75711 98 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 SFT2D2O95562 160 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 TNFP01375 233 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 IFNA21P01568 189 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGKV1D-16P01601 117 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 HLA-AP01891 365 aaKnown RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 CLPSP04118 112 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 CST2P09228 141 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 GIMD1P0DJR0 217 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 GTF2F2P13984 249 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 HIST1H1CP16403 213 aaKnown RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGFBP3P17936 291 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 HNF1AP20823 631 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 HNRNPA2B1P22626 353 aaKnown RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 CAMLGP49069 296 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 RAB7AP51149 207 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 FGF8P55075 233 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 CLDN18P56856 261 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 UBE2NP61088 152 aaKnown RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 ARG2P78540 354 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF92Q03936 586 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 SCGB2A2Q13296 93 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 GPM6BQ13491 265 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR5I1Q13606 314 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 PSG3Q16557 428 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 IQCJQ1A5X6 159 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 Q499Y3 187 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 DEFB134Q4QY38 66 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 TP53I3Q53FA7 332 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 PDZD11Q5EBL8 140 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 SOHLH1Q5JUK2 328 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACTL10Q5JWF8 245 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 VAX1Q5SQQ9 334 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 C1orf100Q5SVJ3 147 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 COL5A1-AS1Q5SY13 56 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 FAM120AOSQ5T036 256 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 C1orf185Q5T7R7 199 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 ASCL4Q6XD76 172 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 DGAT2L6Q6ZPD8 337 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPP1R27Q86WC6 154 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 C17orf82Q86X59 251 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC35F2Q8IXU6 374 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM156Q8N614 296 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF321PQ8N8H1 164 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR52R1Q8NGF1 315 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR52E2Q8NGJ4 325 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR51G1Q8NGK1 321 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR4D5Q8NGN0 318 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR1L6Q8NGR2 347 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR51A7Q8NH64 312 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 PFN4Q8NHR9 129 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF721Q8TF20 911 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 FAM3CQ92520 227 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 RERGQ96A58 199 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 GPR146Q96CH1 333 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 C16orf74Q96GX8 76 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR10C1Q96KK4 312 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 C2orf50Q96LR7 162 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 PHB2Q99623 299 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 RARRES2Q99969 163 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 RTBDNQ9BSG5 229 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 ALG12Q9BV10 488 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPDPFQ9H3Y8 114 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 TAF9BQ9HBM6 251 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 HRASLS2Q9NWW9 162 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 COMMD9Q9P000 198 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 SPRR3Q9UBC9 169 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 SH3BGRL2Q9UJC5 107 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 DKKL1Q9UK85 242 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 IER3IP1Q9Y5U9 82 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM14AQ9Y6G1 99 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 KMT2EQ8IZD2 1858 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 PCDH15Q96QU1 1955 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 DNAH12Q6ZR08 3092 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 SPAG17Q6Q759 2223 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 RTTNQ86VV8 2226 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 MYOFQ9NZM1 2061 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ARHGAP21Q5T5U3 1957 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 THADAQ6YHU6 1953 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM131Q92545 1883 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGKV1D-42A0A075B6H8 117 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRAV27A0A087WT01 109 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGKV3D-11A0A0A0MRZ8 115 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 A0A1W2PQD3 144 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 RBFOX3A6NFN3 312 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM212A6NML5 194 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF736B4DX44 427 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 H0Y9J4 135 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 K7EPK0 472 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 GEMIN2O14893 280 aaKnown RBP2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC31A1O15431 190 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 CYB5BO43169 146 aa2.29□□□□□ -2.04
HMGB1P41-201ENST00000520234 DUX1O43812 170 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms