RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 S100ZQ8WXG8 99 aa17.74■□□□□ 0.43
SKP1-206ENST00000519321 MRGPRFQ96AM1 343 aa17.74■□□□□ 0.43
SKP1-206ENST00000519321 R3HDM4Q96D70 268 aa17.74■□□□□ 0.43
SKP1-206ENST00000519321 ZNF430Q9H8G1 570 aaPredicted RBP17.74■□□□□ 0.43
SKP1-206ENST00000519321 ZFP57Q9NU63 452 aa17.74■□□□□ 0.43
SKP1-206ENST00000519321 GPR132Q9UNW8 380 aa17.74■□□□□ 0.43
SKP1-206ENST00000519321 DNHD1Q96M86 4753 aa17.74■□□□□ 0.43
SKP1-206ENST00000519321 ARPC1BO15143 372 aaKnown RBP17.73■□□□□ 0.43
SKP1-206ENST00000519321 EGR2P11161 476 aaPredicted RBP17.73■□□□□ 0.43
SKP1-206ENST00000519321 PI3P19957 117 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 TNXAQ16473 311 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 BAK1Q16611 211 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 ECSCRQ19T08 205 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 TCTEX1D4Q5JR98 221 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 SSX9Q7RTT3 188 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 CADM3Q8N126 398 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 MINDY2Q8NBR6 621 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 DMBX1Q8NFW5 382 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 GRPEL2Q8TAA5 225 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 FBXO7Q9Y3I1 522 aa17.73■□□□□ 0.43
SKP1-206ENST00000519321 G3V318 75 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 H0Y980 276 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 RPA2P15927 270 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 MRGPRG-AS1Q2M3A8 158 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 ZNF585BQ52M93 769 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 KHDC1LQ5JSQ8 128 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 PRR31Q5SQ13 230 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 OR4A47Q6IF82 309 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 UNQ5815/PRO19632Q6UWF5 114 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 RNF152Q8N8N0 203 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 FAM103A1Q9BTL3 118 aaKnown RBP17.72■□□□□ 0.43
SKP1-206ENST00000519321 AKIP1Q9NQ31 210 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 FOXA2Q9Y261 457 aaPredicted RBP17.72■□□□□ 0.43
SKP1-206ENST00000519321 ANK2Q01484 3957 aa17.72■□□□□ 0.43
SKP1-206ENST00000519321 C3orf85A0A1B0GTC6 90 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 NAP1L6A6NFF2 107 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 MARCH11A6NNE9 402 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 SERPINE2P07093 398 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 FGF2P09038 288 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 CD40LGP29965 261 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 RPL8P62917 257 aaKnown RBP17.71■□□□□ 0.43
SKP1-206ENST00000519321 SSBP2P81877 361 aaPredicted RBP17.71■□□□□ 0.43
SKP1-206ENST00000519321 NSUN5P1Q3KNT7 163 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 C19orf54Q5BKX5 351 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 TMEM65Q6PI78 240 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 LFNGQ8NES3 379 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 OR5M8Q8NGP6 311 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 SDHCQ99643 169 aaPredicted RBP17.71■□□□□ 0.43
SKP1-206ENST00000519321 C5orf66Q9H5L9 145 aa17.71■□□□□ 0.43
SKP1-206ENST00000519321 A0A1W2PN81 502 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 IGLV1-40P01703 118 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 PSMB8P28062 276 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 CHRNA7P36544 502 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 OR4F17Q8NGA8 305 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 SRSF12Q8WXF0 261 aaKnown RBP17.7■□□□□ 0.42
SKP1-206ENST00000519321 OR4F4Q96R69 305 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 PHB2Q99623 299 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 SPIN2AQ99865 258 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 SPIN2BQ9BPZ2 258 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 SLC25A21Q9BQT8 299 aaPredicted RBP17.7■□□□□ 0.42
SKP1-206ENST00000519321 C7orf50Q9BRJ6 194 aaKnown RBP17.7■□□□□ 0.42
SKP1-206ENST00000519321 RTBDNQ9BSG5 229 aaPredicted RBP17.7■□□□□ 0.42
SKP1-206ENST00000519321 CCDC32Q9BV29 185 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 TMEM140Q9NV12 185 aa17.7■□□□□ 0.42
SKP1-206ENST00000519321 PLXNB1O43157 2135 aa17.69■□□□□ 0.42
SKP1-206ENST00000519321 CENPXA8MT69 81 aa17.69■□□□□ 0.42
SKP1-206ENST00000519321 ATG12O94817 140 aa17.69■□□□□ 0.42
SKP1-206ENST00000519321 KRASP01116 189 aa17.69■□□□□ 0.42
SKP1-206ENST00000519321 IL7P13232 177 aa17.69■□□□□ 0.42
SKP1-206ENST00000519321 SLC6A1P30531 599 aa17.69■□□□□ 0.42
SKP1-206ENST00000519321 RPL23AP62750 156 aaKnown RBP17.69■□□□□ 0.42
SKP1-206ENST00000519321 TEX13DA0A0J9YY54 714 aaPredicted RBP17.68■□□□□ 0.42
SKP1-206ENST00000519321 MSGN1A6NI15 193 aa17.68■□□□□ 0.42
SKP1-206ENST00000519321 ADARB2-AS1A8MUL3 147 aa17.68■□□□□ 0.42
SKP1-206ENST00000519321 UPK2O00526 184 aa17.68■□□□□ 0.42
SKP1-206ENST00000519321 IL6RP08887 468 aaPredicted RBP17.68■□□□□ 0.42
SKP1-206ENST00000519321 HIST2H2BDQ6DRA6 164 aa17.68■□□□□ 0.42
SKP1-206ENST00000519321 SGPP2Q8IWX5 399 aa17.68■□□□□ 0.42
SKP1-206ENST00000519321 TSC22D3Q99576 134 aa17.68■□□□□ 0.42
SKP1-206ENST00000519321 RPLP1P05386 114 aaKnown RBP17.67■□□□□ 0.42
SKP1-206ENST00000519321 PF4V1P10720 104 aa17.67■□□□□ 0.42
SKP1-206ENST00000519321 HLA-GP17693 338 aa17.67■□□□□ 0.42
SKP1-206ENST00000519321 G6PCP35575 357 aa17.67■□□□□ 0.42
SKP1-206ENST00000519321 RPL27AP46776 148 aaKnown RBP17.67■□□□□ 0.42
SKP1-206ENST00000519321 TP53RKQ96S44 253 aa17.67■□□□□ 0.42
SKP1-206ENST00000519321 NAA60Q9H7X0 242 aa17.67■□□□□ 0.42
SKP1-206ENST00000519321 KCNIP3Q9Y2W7 256 aa17.67■□□□□ 0.42
SKP1-206ENST00000519321 A0A1W2PRX2 142 aa17.66■□□□□ 0.42
SKP1-206ENST00000519321 H3BUA1 57 aa17.66■□□□□ 0.42
SKP1-206ENST00000519321 SNAPC5O75971 98 aa17.66■□□□□ 0.42
SKP1-206ENST00000519321 DHODHQ02127 395 aa17.66■□□□□ 0.42
SKP1-206ENST00000519321 WDR12Q9GZL7 423 aaKnown RBP17.66■□□□□ 0.42
SKP1-206ENST00000519321 COMMD5Q9GZQ3 224 aa17.66■□□□□ 0.42
SKP1-206ENST00000519321 SLA2Q9H6Q3 261 aa17.66■□□□□ 0.42
SKP1-206ENST00000519321 VSIG4Q9Y279 399 aa17.66■□□□□ 0.42
SKP1-206ENST00000519321 CRYM-AS1A6NIL9 109 aa17.65■□□□□ 0.42
SKP1-206ENST00000519321 UCP1P25874 307 aa17.65■□□□□ 0.42
SKP1-206ENST00000519321 CDX1P47902 265 aaPredicted RBP17.65■□□□□ 0.42
SKP1-206ENST00000519321 RAB9AP51151 201 aa17.65■□□□□ 0.42
SKP1-206ENST00000519321 RBMS2Q15434 407 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms