RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	TEX36	Q5VZQ5	186 aa		-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	COPS6	Q7L5N1	327 aa		-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	TMEM86A	Q8N2M4	240 aa		-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	OR5B17	Q8NGF7	314 aa		-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	AQP3	Q92482	292 aa		-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	MSANTD3	Q96H12	275 aa		-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	NSRP1	Q9H0G5	558 aa	Known RBP	-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	ZNHIT6	Q9NWK9	470 aa	Known RBP	-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	NUP153	P49790	1475 aa	Known RBP	-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	EML6	Q6ZMW3	1958 aa		-0.06	□□□□□ -2.42
PCM1-208	ENST00000518877	COL4A5	P29400	1685 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	TRBV6-7	A0A0A0MS04	114 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	COX7A2L	O14548	114 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	ATP8B1	O43520	1251 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	CFL1	P23528	166 aa	Known RBP	-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	EMP1	P54849	157 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	ZNF345	Q14585	488 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	DHFR2	Q86XF0	187 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	C10orf67	Q8IYJ2	551 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	BOD1L2	Q8IYS8	172 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	C17orf78	Q8N4C9	275 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	STOML3	Q8TAV4	291 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	ASB13	Q8WXK3	278 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	CYTH2	Q99418	400 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	TRABD	Q9H4I3	376 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	HRASLS	Q9HDD0	168 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	COQ4	Q9Y3A0	265 aa		-0.07	□□□□□ -2.42
PCM1-208	ENST00000518877	LOC110117498	A0A087WWA1	95 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	DAPL1	A0PJW8	107 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	SMLR1	H3BR10	107 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	ITGB1BP1	O14713	200 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	LEPROT	O15243	131 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	LINC00614	P0C842	121 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	MSN	P26038	577 aa	Known RBP	-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	ZNF93	P35789	620 aa	Predicted RBP	-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	HIST1H4A	P62805	103 aa	Known RBP	-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	ZNHIT3	Q15649	155 aa	Predicted RBP	-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	C9orf64	Q5T6V5	341 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	SPATA8	Q6RVD6	105 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	ZNF676	Q8N7Q3	588 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	OR52E4	Q8NGH9	312 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	SLC37A2	Q8TED4	501 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	LRRC45	Q96CN5	670 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	CCDC124	Q96CT7	223 aa	Known RBP	-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	GNPNAT1	Q96EK6	184 aa	Predicted RBP	-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	CCL13	Q99616	98 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	AGPAT3	Q9NRZ7	376 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	BAIAP2	Q9UQB8	552 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	MEGF8	Q7Z7M0	2845 aa		-0.08	□□□□□ -2.42
PCM1-208	ENST00000518877	NUP160	Q12769	1436 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	TRAV14DV4	A0A0A6YYC5	116 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877		H0YC42	278 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	PMP2	P02689	132 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	CLPS	P04118	112 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	HLA-DMB	P28068	263 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	SLCO1A2	P46721	670 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	AP1S1	P61966	158 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	RPS24	P62847	133 aa	Known RBP	-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	HLA-DRB3	P79483	266 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	HLA-DRB5	Q30154	266 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	FAM45BP	Q6NSW5	357 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	SPERT	Q8NA61	448 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	SERPINI1	Q99574	410 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	BBS2	Q9BXC9	721 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	METTL9	Q9H1A3	318 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	C10orf95	Q9H7T3	257 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	ASH1L	Q9NR48	2969 aa	Known RBP	-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	CD300A	Q9UGN4	299 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	PRELID1	Q9Y255	219 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	BDP1	A6H8Y1	2624 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	ANAPC1	Q9H1A4	1944 aa		-0.09	□□□□□ -2.42
PCM1-208	ENST00000518877	TRBV10-2	A0A0K0K1G8	114 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	SDCBP	O00560	298 aa	Predicted RBP	-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	CCDC172	P0C7W6	258 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	KDELR2	P33947	212 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	SUPT4H1	P63272	117 aa	Known RBP	-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	UBE2I	P63279	158 aa	Known RBP	-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	AKR1C1	Q04828	323 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	SYCP1	Q15431	976 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	SSX8	Q7RTT4	187 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	C12orf29	Q8N999	325 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	OR1M1	Q8NGA1	313 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	OR2T27	Q8NH04	317 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	ERMAP	Q96PL5	475 aa	Predicted RBP	-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	MRPL57	Q9BQC6	102 aa	Known RBP	-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	SIKE1	Q9BRV8	207 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	SPRR2G	Q9BYE4	73 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	MS4A6A	Q9H2W1	248 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	CXorf21	Q9HAI6	301 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	TP53TG1	Q9Y2A0	90 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	FSIP2	Q5CZC0	6907 aa		-0.1	□□□□□ -2.43
PCM1-208	ENST00000518877	MAP3K19	Q56UN5	1328 aa		-0.11	□□□□□ -2.43
PCM1-208	ENST00000518877	SYNRG	Q9UMZ2	1314 aa		-0.11	□□□□□ -2.43
PCM1-208	ENST00000518877	MKRN2OS	H3BPM6	223 aa		-0.11	□□□□□ -2.43
PCM1-208	ENST00000518877	APOM	O95445	188 aa		-0.11	□□□□□ -2.43
PCM1-208	ENST00000518877	ATP6V1G2	O95670	118 aa		-0.11	□□□□□ -2.43
PCM1-208	ENST00000518877	IVL	P07476	585 aa		-0.11	□□□□□ -2.43
PCM1-208	ENST00000518877	KISS1	Q15726	138 aa		-0.11	□□□□□ -2.43
PCM1-208	ENST00000518877	CLEC12B	Q2HXU8	276 aa		-0.11	□□□□□ -2.43

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms