RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PHB2Q99623 299 aa10.26□□□□□ -0.77
VEGFA-219ENST00000518824 TINAGL1Q9GZM7 467 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-219ENST00000518824 ADAM30Q9UKF2 790 aa10.26□□□□□ -0.77
VEGFA-219ENST00000518824 CEPT1Q9Y6K0 416 aa10.26□□□□□ -0.77
VEGFA-219ENST00000518824 SEC14L6B5MCN3 397 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 DUS4LO95620 317 aaKnown RBP10.25□□□□□ -0.77
VEGFA-219ENST00000518824 RCVRNP35243 200 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 TMBIM6P55061 237 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 DGCR2P98153 550 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 ZNF585BQ52M93 769 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 AADACL3Q5VUY0 350 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 OR4A47Q6IF82 309 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 PYHIN1Q6K0P9 492 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 OR4D10Q8NGI6 311 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 ISOC1Q96CN7 298 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 COA4Q9NYJ1 87 aa10.25□□□□□ -0.77
VEGFA-219ENST00000518824 ANKRD34BA5PLL1 514 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 LINC01619G3V211 115 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 RGS5O15539 181 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 CD3DP04234 171 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 OR8U8P0C7N1 319 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 KIR2DS2P43631 304 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 FCAMRQ8WWV6 532 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 DPF1Q92782 380 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 FYTTD1Q96QD9 318 aaKnown RBP10.24□□□□□ -0.77
VEGFA-219ENST00000518824 SLIRPQ9GZT3 109 aaKnown RBP10.24□□□□□ -0.77
VEGFA-219ENST00000518824 SLA2Q9H6Q3 261 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 MTFP1Q9UDX5 166 aa10.24□□□□□ -0.77
VEGFA-219ENST00000518824 MPPED1O15442 326 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.775e-9■□□□□ 10.6
VEGFA-219ENST00000518824 HPRT1P00492 218 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 HSPB1P04792 205 aaKnown RBP10.23□□□□□ -0.77
VEGFA-219ENST00000518824 OR9G9P0C7N8 305 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 AREGP15514 252 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 LPAR6P43657 344 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 RPL27AP46776 148 aaKnown RBP10.23□□□□□ -0.77
VEGFA-219ENST00000518824 TSPAN5P62079 268 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 CATR1Q13166 79 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 VAX1Q5SQQ9 334 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 FAAP20Q6NZ36 180 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 REC114Q7Z4M0 266 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 TMEM68Q96MH6 324 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 MCRIP2Q9BUT9 160 aaKnown RBP10.23□□□□□ -0.77
VEGFA-219ENST00000518824 RSRP1Q9BUV0 290 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 AKIP1Q9NQ31 210 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 BET1LQ9NYM9 111 aa10.23□□□□□ -0.77
VEGFA-219ENST00000518824 CCDC59Q9P031 241 aaKnown RBP10.23□□□□□ -0.77
VEGFA-219ENST00000518824 H3BUA1 57 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 GPR31O00270 319 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 UPK2O00526 184 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 OVOL1O14753 267 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 ACTL6BO94805 426 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 HRASP01112 189 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 REG1AP05451 166 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 ZNF735P0CB33 412 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 PI3P19957 117 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 F2RP25116 425 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 CD40LGP29965 261 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 TAS2R31P59538 309 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 POU2AF1Q16633 256 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 C9orf66Q5T8R8 295 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 HAPLN4Q86UW8 402 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 LHFPL1Q86WI0 220 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 TTC9CQ8N5M4 171 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 MRGPRFQ96AM1 343 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 DGCR14Q96DF8 476 aaKnown RBP10.22□□□□□ -0.77
VEGFA-219ENST00000518824 PRR25Q96S07 402 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 BCL7BQ9BQE9 202 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 HRASLSQ9HDD0 168 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 TMEM140Q9NV12 185 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 NSG2Q9Y328 171 aa10.22□□□□□ -0.77
VEGFA-219ENST00000518824 TRBV9A0A0B4J1U6 114 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 C13orf42A0A1B0GVH6 325 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 OR2J3O76001 311 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 BRI3O95415 125 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 IGKV1-39P01597 117 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 IGKV1D-39P04432 117 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 NQO2P16083 231 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 HLA-GP17693 338 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 G6PCP35575 357 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 OR2B8PP59922 312 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 RPL8P62917 257 aaKnown RBP10.21□□□□□ -0.77
VEGFA-219ENST00000518824 RHOGP84095 191 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 ZNF343Q6P1L6 599 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 TBC1D26Q86UD7 250 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 DIRAS2Q96HU8 199 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 FANCD2OSQ96PS1 177 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 SPIN2AQ99865 258 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 SPIN2BQ9BPZ2 258 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 C6orf62Q9GZU0 229 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-219ENST00000518824 RBM38Q9H0Z9 239 aaKnown RBP10.21□□□□□ -0.77
VEGFA-219ENST00000518824 PLEKHA2Q9HB19 425 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 S4R3C0 116 aa10.21□□□□□ -0.77
VEGFA-219ENST00000518824 DBX1A6NMT0 343 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 GABARAPH6UMI1 98 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 CREBL2O60519 120 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-219ENST00000518824 NDUFB8O95169 186 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms