RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 CEACAM6P40199 344 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 PI4KAP42356 2102 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 RPS10P46783 165 aaKnown RBP4.26□□□□□ -1.73
HDAC2-204ENST00000518756 PSMB3P49720 205 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 NOVA1P51513 510 aaKnown RBP4.26□□□□□ -1.73
HDAC2-204ENST00000518756 CD81P60033 236 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 PPP1CBP62140 327 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 ZNF146Q15072 292 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 GFI1BQ5VTD9 330 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 SLC35E4Q6ICL7 350 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 ADAM5Q6NVV9 412 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 TIPARPQ7Z3E1 657 aaKnown RBP4.26□□□□□ -1.73
HDAC2-204ENST00000518756 GCNT2Q8N0V5 402 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 ZNF645Q8N7E2 425 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 WDR31Q8NA23 367 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 FGFBP3Q8TAT2 258 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 HPSE2Q8WWQ2 592 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 HIST1H2BAQ96A08 127 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 GPR146Q96CH1 333 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 SIGLEC12Q96PQ1 595 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 CHRDL1Q9BU40 450 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 ADAT1Q9BUB4 502 aaKnown RBP4.26□□□□□ -1.73
HDAC2-204ENST00000518756 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 PARP12Q9H0J9 701 aaKnown RBP4.26□□□□□ -1.73
HDAC2-204ENST00000518756 MAGT1Q9H0U3 335 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 CXXC4Q9H2H0 198 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 ARRDC1-AS1Q9H2J1 176 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 PRO3102Q9H379 93 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 LIME1Q9H400 295 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 WFDC1Q9HC57 220 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 TMEM9BQ9NQ34 198 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 MANBALQ9NQG1 85 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 KCNIP2Q9NS61 270 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-204ENST00000518756 SLC39A9Q9NUM3 307 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 TMEM242Q9NWH2 141 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 OR14J1Q9UGF5 321 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 VAX2Q9UIW0 290 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 PAM16Q9Y3D7 125 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 WIPI2Q9Y4P8 454 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 KMT2EQ8IZD2 1858 aa4.26□□□□□ -1.73
HDAC2-204ENST00000518756 IQCF6A8MYZ5 107 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 H3BQ15 152 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 CLDN34H7C241 214 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 IFNL4K9M1U5 179 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SIRPB1O00241 398 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SPINT2O43291 252 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 TNFSF12O43508 249 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SYNGR1O43759 233 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 FCGR3BO75015 233 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 TNFSF15O95150 251 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 OR2H2O95918 312 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 HAND1O96004 215 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 IGKV3-20P01619 116 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SRP19P09132 144 aaKnown RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 PGA5P0DJD9 388 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 PSG2P11465 335 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 CBR1P16152 277 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 RAB4AP20338 218 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 COX5AP20674 150 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ANOS1P23352 680 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 EIF2S3P41091 472 aaKnown RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 KIR2DS2P43631 304 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ERVFC1-1P60608 527 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SNRPEP62304 92 aaKnown RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 RPL19P84098 196 aaKnown RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ZNF154Q13106 437 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 VAMP3Q15836 100 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 HAGHQ16775 308 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 LRRC75BQ2VPJ9 315 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SMIM21Q3B7S5 101 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ACOT6Q3I5F7 207 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ZNF718Q3SXZ3 478 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 CXorf66Q5JRM2 361 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SPANXN5Q5MJ07 72 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SERTAD4-AS1Q5TG53 156 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 OR2T2Q6IF00 324 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ZNF497Q6ZNH5 498 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 H2BFWTQ7Z2G1 175 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 MDP1Q86V88 176 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 C1orf87Q8N0U7 546 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ZFP82Q8N141 532 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 FAM24BQ8N5W8 94 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SCCPDHQ8NBX0 429 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 MDS2Q8NDY4 140 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 OR10P1Q8NGE3 313 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 MBD3L1Q8WWY6 194 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 OR5B12Q96R08 314 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 HSD17B10Q99714 261 aaKnown RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ZNF251Q9BRH9 671 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ATG101Q9BSB4 218 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 C20orf24Q9BUV8 137 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SPRY4Q9C004 299 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 ACTR3CQ9C0K3 210 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-204ENST00000518756 SH3BGRL3Q9H299 93 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 C11orf1Q9H5F2 150 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 GNG13Q9P2W3 67 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 CACNG5Q9UF02 275 aa4.25□□□□□ -1.73
HDAC2-204ENST00000518756 PPP1R3CQ9UQK1 317 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms