RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TRRAPQ9Y4A5 3859 aa17.17■□□□□ 0.34
VEGFA-217ENST00000518538 NUDT19A8MXV4 375 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 DISC1C4P0D8 188 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 S1PR2O95136 353 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 NQO2P16083 231 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 CDX1P47902 265 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-217ENST00000518538 PPP5CP53041 499 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 RND3P61587 244 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 SPANXN2Q5MJ10 180 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 TBC1D26Q86UD7 250 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 ZNF695Q8IW36 515 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 OR4A5Q8NH83 315 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 SRSF12Q8WXF0 261 aaKnown RBP17.16■□□□□ 0.34
VEGFA-217ENST00000518538 KLK15Q9H2R5 256 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 FAM212BQ9NTI7 297 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-217ENST00000518538 BET1LQ9NYM9 111 aa17.16■□□□□ 0.34
VEGFA-217ENST00000518538 PF4P02776 101 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 ECI1P42126 302 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 RAB9AP51151 201 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 OR4A47Q6IF82 309 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 C8orf86Q6ZUL3 223 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 Q8N402 240 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 ZFAND1Q8TCF1 268 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 TRIM63Q969Q1 353 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 WNK1Q9H4A3 2382 aa17.15■□□□□ 0.34
VEGFA-217ENST00000518538 FBN3Q75N90 2809 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 MSGN1A6NI15 193 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 MAS1LP35410 378 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 LPAR6P43657 344 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 ZNF585BQ52M93 769 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 ASPHD1Q5U4P2 390 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 OR13C8Q8NGS7 320 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 C4orf3Q8WVX3 66 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 MRGPRFQ96AM1 343 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 UBE2E2Q96LR5 201 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 PHB2Q99623 299 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 HRASLSQ9HDD0 168 aa17.14■□□□□ 0.33
VEGFA-217ENST00000518538 MPPED1O15442 326 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 PI3P19957 117 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 CD40LGP29965 261 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 PIGPP57054 158 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 ERVK-16P61578 105 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 KIAA0141Q14154 515 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-217ENST00000518538 C10orf55Q5SWW7 151 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 ZNF491Q8N8L2 437 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 DMBX1Q8NFW5 382 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 SPIN2AQ99865 258 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 PRRT1Q99946 306 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 SPIN2BQ9BPZ2 258 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 SLC2A8Q9NY64 477 aa17.13■□□□□ 0.33
VEGFA-217ENST00000518538 MARCH11A6NNE9 402 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 H3BUA1 57 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 IL6RP08887 468 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-217ENST00000518538 AP3S2P59780 193 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 RPL8P62917 257 aaKnown RBP17.12■□□□□ 0.33
VEGFA-217ENST00000518538 SURF2Q15527 256 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-217ENST00000518538 ETV3LQ6ZN32 361 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 OR51S1Q8NGJ8 323 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 MARCH1Q8TCQ1 289 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 SLA2Q9H6Q3 261 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 TMEM140Q9NV12 185 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 VSIG4Q9Y279 399 aa17.12■□□□□ 0.33
VEGFA-217ENST00000518538 VWFP04275 2813 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 CTSDP07339 412 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-217ENST00000518538 FGF2P09038 288 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 MYCNOSP40205 109 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 KLF9Q13886 244 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-217ENST00000518538 CADM3Q8N126 398 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 CCDC71LQ8N9Z2 235 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 OR5T1Q8NG75 326 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 CASTOR1Q8WTX7 329 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 SRRQ9GZT4 340 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 COPZ2Q9P299 210 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 SCP2D1Q9UJQ7 156 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 PKD1L1Q8TDX9 2849 aa17.11■□□□□ 0.33
VEGFA-217ENST00000518538 MGAM2Q2M2H8 2515 aa17.1■□□□□ 0.33
VEGFA-217ENST00000518538 A6NHS1 94 aa17.1■□□□□ 0.33
VEGFA-217ENST00000518538 UPK2O00526 184 aa17.1■□□□□ 0.33
VEGFA-217ENST00000518538 APELAP0DMC3 54 aa17.1■□□□□ 0.33
VEGFA-217ENST00000518538 HLA-GP17693 338 aa17.1■□□□□ 0.33
VEGFA-217ENST00000518538 FAUP35544 74 aaKnown RBP17.1■□□□□ 0.33
VEGFA-217ENST00000518538 RPL27AP46776 148 aaKnown RBP17.1■□□□□ 0.33
VEGFA-217ENST00000518538 TOMM5Q8N4H5 51 aa17.1■□□□□ 0.33
VEGFA-217ENST00000518538 GNB4Q9HAV0 340 aa17.1■□□□□ 0.33
VEGFA-217ENST00000518538 MCUBQ9NWR8 336 aa17.1■□□□□ 0.33
VEGFA-217ENST00000518538 C14orf166Q9Y224 244 aaKnown RBP17.1■□□□□ 0.33
VEGFA-217ENST00000518538 H0Y980 276 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 CCL24O00175 119 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 BRI3O95415 125 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 KRASP01116 189 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 RPA2P15927 270 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 G6PCP35575 357 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 TPPP2P59282 170 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 RUNX1Q01196 453 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 WFDC9Q8NEX5 89 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 DEDD2Q8WXF8 326 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 RAX2Q96IS3 184 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 MS4A10Q96PG2 267 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 P2RX4Q99571 388 aa17.09■□□□□ 0.33
VEGFA-217ENST00000518538 ZNF355PQ9NSJ1 428 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms