RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ARL16Q0P5N6 197 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 ZNF726P1Q15940 193 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 KIAA1644Q3SXP7 199 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 TRIM61Q5EBN2 209 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 CENPWQ5EE01 88 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 C1orf185Q5T7R7 199 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 CDCP2Q5VXM1 449 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 LYG1Q8N1E2 194 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 C19orf24Q9BVV8 132 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 MAP1LC3CQ9BXW4 147 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 NRN1Q9NPD7 142 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 WDR83OSQ9Y284 106 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 YTHDF2Q9Y5A9 579 aaKnown RBP5.62□□□□□ -1.51
CPNE3-203ENST00000517490 NOTCH4Q99466 2003 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 TRGV5A0A0B4J1U4 118 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 A0A1B0GWJ7 208 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 EPOPA6NHQ4 379 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 C17orf98A8MV24 154 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 NPIPB11E5RHQ5 1161 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 GNB1P62873 340 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 MRPS11P82912 194 aaKnown RBP5.62□□□□□ -1.51
CPNE3-203ENST00000517490 MRPL14Q6P1L8 145 aaKnown RBP5.62□□□□□ -1.51
CPNE3-203ENST00000517490 C12orf54Q6X4T0 127 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 ZNF497Q6ZNH5 498 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 FA2HQ7L5A8 372 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 PYGO2Q9BRQ0 406 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 SCRT1Q9BWW7 348 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 GNB1LQ9BYB4 327 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 CDC42EP3Q9UKI2 254 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 LOC102723996A0A087X1L8 192 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 A0A1W2PQM1 296 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 C12orf77C9JDV5 145 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 ZNHIT1O43257 154 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 IL6RP08887 468 aaPredicted RBP5.62□□□□□ -1.51
CPNE3-203ENST00000517490 CRYBB3P26998 211 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 TIMP3P35625 211 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 MEOX1P50221 254 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 RELQ04864 619 aaPredicted RBP5.62□□□□□ -1.51
CPNE3-203ENST00000517490 STPG3Q8N7X2 389 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 DNASE2BQ8WZ79 361 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 IMMP1LQ96LU5 166 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 ZFP30Q9Y2G7 519 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 ZNF835Q9Y2P0 537 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 RHBDL1O75783 438 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 MAGEA5P43359 124 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 GAGE1Q13065 139 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 AARDQ4LEZ3 155 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 OR10J3Q5JRS4 329 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 Q6ZRM9 215 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 Q6ZSR3 168 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 GTF2H5Q6ZYL4 71 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 OR2Z1Q8NG97 314 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 PLPPR1Q8TBJ4 325 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 RAB1CQ92928 201 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 TCF19Q9Y242 345 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 RALGAPA1Q6GYQ0 2036 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 TMPRSS2O15393 492 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 MT-CO3P00414 261 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 LINC00869P0C866 280 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 BTF3P20290 206 aaKnown RBP5.61□□□□□ -1.51
CPNE3-203ENST00000517490 KLF3P57682 345 aaPredicted RBP5.61□□□□□ -1.51
CPNE3-203ENST00000517490 FXYD3Q14802 87 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 MOGAT3Q86VF5 341 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 PDPNQ86YL7 162 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 OCC1Q8TAD7 63 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 FGFBP3Q8TAT2 258 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 HES4Q9HCC6 221 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 TMEM140Q9NV12 185 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 HSPB8Q9UJY1 196 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 UMODP07911 640 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 HSPE1P61604 102 aaKnown RBP5.61□□□□□ -1.51
CPNE3-203ENST00000517490 RSPO1Q2MKA7 263 aaPredicted RBP5.61□□□□□ -1.51
CPNE3-203ENST00000517490 INO80CQ6PI98 192 aaPredicted RBP5.61□□□□□ -1.51
CPNE3-203ENST00000517490 STXBP6Q8NFX7 210 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 CT55Q8WUE5 264 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 YPEL4Q96NS1 127 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 ZNF703Q9H7S9 590 aaPredicted RBP5.61□□□□□ -1.51
CPNE3-203ENST00000517490 LPAR2Q9HBW0 351 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 MRPS18CQ9Y3D5 142 aaKnown RBP5.61□□□□□ -1.51
CPNE3-203ENST00000517490 OR51B2Q9Y5P1 312 aa5.61□□□□□ -1.51
CPNE3-203ENST00000517490 J3QR06 171 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 TNFSF15O95150 251 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 CT45A10P0DMU9 189 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 GNG10P50151 68 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 PLGLAQ15195 96 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 ZNF766Q5HY98 468 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 RNFT1Q5M7Z0 435 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 OR4A47Q6IF82 309 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 NEU1Q99519 415 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 TEX50A0A1B0GTY4 177 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 J3QR89 54 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 URB1O60287 2271 aaKnown RBP5.6□□□□□ -1.51
CPNE3-203ENST00000517490 HTR1DP28221 377 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 C5orf24Q7Z6I8 188 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 ABHD12Q8N2K0 398 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 GAL3ST2Q9H3Q3 398 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 JPT1Q9UK76 154 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 IGKV1-6A0A0C4DH72 117 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 MGST3O14880 152 aa5.6□□□□□ -1.51
CPNE3-203ENST00000517490 LYZL6O75951 148 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms