RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 OR2C3Q8N628 320 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 LINC01356Q8N9X3 169 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 OR4A16Q8NH70 328 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 STOML3Q8TAV4 291 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 TBX15Q96SF7 602 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 SIRT7Q9NRC8 400 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 TMEM140Q9NV12 185 aa7.34□□□□□ -1.23
NR1I3-234ENST00000515621 LSM5Q9Y4Y9 91 aaKnown RBP7.34□□□□□ -1.23
NR1I3-234ENST00000515621 USF3Q68DE3 2245 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 H7C2Y5 167 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 SHOXO15266 292 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 JTBO76095 146 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 KBTBD11O94819 623 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 IFNA7P01567 189 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 IGKV1-16P04430 117 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 HKR1P10072 659 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 COX7A1P24310 79 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 COL8A1P27658 744 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 AP2S1P53680 142 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-234ENST00000515621 POLR2GP62487 172 aaKnown RBP eCLIP7.33□□□□□ -1.24
NR1I3-234ENST00000515621 RPP30P78346 268 aaKnown RBP7.33□□□□□ -1.24
NR1I3-234ENST00000515621 EBI3Q14213 229 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 STX12Q86Y82 276 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
NR1I3-234ENST00000515621 TEX29Q8N6K0 151 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 OR8H1Q8NGG4 311 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 CLCC1Q96S66 551 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 SRSF8Q9BRL6 282 aaKnown RBP7.33□□□□□ -1.24
NR1I3-234ENST00000515621 MMP26Q9NRE1 261 aa7.33□□□□□ -1.24
NR1I3-234ENST00000515621 UPK2O00526 184 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 CHST1O43916 411 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 SSSCA1O60232 199 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 TSPAN9O75954 239 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 VENTXO95231 258 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 SAA1P0DJI8 122 aaPredicted RBP7.32□□□□□ -1.24
NR1I3-234ENST00000515621 BRS3P32247 399 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 SULT1A1P50225 295 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 KRTAP10-9P60411 292 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 HSPE1P61604 102 aaKnown RBP7.32□□□□□ -1.24
NR1I3-234ENST00000515621 HBG1P69891 147 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 HBG2P69892 147 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 ZNF266Q14584 549 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 AANATQ16613 207 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 Q5PR19 223 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 EIF5AL1Q6IS14 154 aaKnown RBP7.32□□□□□ -1.24
NR1I3-234ENST00000515621 TEX261Q6UWH6 196 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 HSD17B13Q7Z5P4 300 aaPredicted RBP7.32□□□□□ -1.24
NR1I3-234ENST00000515621 MMD2Q8IY49 270 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 DTD1Q8TEA8 209 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 CFHR4Q92496 578 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 NRGNQ92686 78 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 FOXC2Q99958 501 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 PARD6GQ9BYG4 376 aaPredicted RBP7.32□□□□□ -1.24
NR1I3-234ENST00000515621 REG4Q9BYZ8 158 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 PLSCR3Q9NRY6 295 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 ZNRD1Q9P1U0 126 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 AUP1Q9Y679 476 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 U3KQ87 197 aa7.32□□□□□ -1.24
NR1I3-234ENST00000515621 LRBAP50851 2863 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 BORCS7-ASMTA0A0B4J1R7 106 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 IGHV1-69DA0A0B4J2H0 117 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 A0A1W2PN81 502 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 MSGN1A6NI15 193 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 TIMM23O14925 209 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 NPFFO15130 113 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 RBMXL2O75526 392 aaKnown RBP7.31□□□□□ -1.24
NR1I3-234ENST00000515621 DFFBO76075 338 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 NDUFA3O95167 84 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 MOSP00540 346 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 IGLV2-23P01705 113 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 IGHV1-69P01742 117 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 OR9G9P0C7N8 305 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 TPT1P13693 172 aaKnown RBP7.31□□□□□ -1.24
NR1I3-234ENST00000515621 CHRNA7P36544 502 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 REG1BP48304 166 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 CAV2P51636 162 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 PAX9P55771 341 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 LINC00205P59089 165 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 RPS16P62249 146 aaKnown RBP7.31□□□□□ -1.24
NR1I3-234ENST00000515621 RPL8P62917 257 aaKnown RBP7.31□□□□□ -1.24
NR1I3-234ENST00000515621 PRCDQ00LT1 54 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 IFITM2Q01629 132 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 EWSR1Q01844 656 aaKnown RBP eCLIP7.31□□□□□ -1.24
NR1I3-234ENST00000515621 ATP6V1FQ16864 119 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 TMEM14EPQ6UXP3 125 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 DCHS2Q6V1P9 2916 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 TMEM252Q8N6L7 170 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 UBAC2Q8NBM4 344 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 NPBQ8NG41 125 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 OR2T10Q8NGZ9 312 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 HIPK2Q9H2X6 1198 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 RBKSQ9H477 322 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 NUP50Q9UKX7 468 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 PAIP2BQ9ULR5 123 aaKnown RBP7.31□□□□□ -1.24
NR1I3-234ENST00000515621 TCF19Q9Y242 345 aa7.31□□□□□ -1.24
NR1I3-234ENST00000515621 CENPVL3A0A0U1RRI6 287 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms