RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 OR2J3O76001 311 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 PTHLHP12272 177 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 HERV-K104P61576 105 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 EIF4EBP1Q13541 118 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-215ENST00000515516 UBE2NLQ5JXB2 153 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 LCN12Q6JVE5 192 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 GTSCR1Q86UQ5 136 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 SPAG16Q8N0X2 631 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 PUSL1Q8N0Z8 303 aaKnown RBP10.44□□□□□ -0.74
TCOF1-215ENST00000515516 TSPAN14Q8NG11 270 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 OR5AP2Q8NGF4 316 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 OR4A5Q8NH83 315 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 GIMAP1Q8WWP7 306 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 HRASLSQ9HDD0 168 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.43□□□□□ -0.74
TCOF1-215ENST00000515516 MEIS3P1A6NDR6 274 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 NPIPB5A8MRT5 1133 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 SULT1C2O00338 296 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 TNFAIP8O95379 198 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 DEFA4P12838 97 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 LSM3P62310 102 aaKnown RBP10.43□□□□□ -0.74
TCOF1-215ENST00000515516 RPL8P62917 257 aaKnown RBP10.43□□□□□ -0.74
TCOF1-215ENST00000515516 ZNF45Q02386 682 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 C15orf32Q32M92 178 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 TMEM69Q5SWH9 247 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 Q8N402 240 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 CD300LFQ8TDQ1 290 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 KCTD12Q96CX2 325 aaKnown RBP10.43□□□□□ -0.74
TCOF1-215ENST00000515516 RCHY1Q96PM5 261 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 GPHA2Q96T91 129 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 SLC2A9Q9NRM0 540 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 FBXL7Q9UJT9 491 aa10.43□□□□□ -0.74
TCOF1-215ENST00000515516 TEX22C9J3V5 150 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 C3orf84H3BNL1 204 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.74
TCOF1-215ENST00000515516 GGCTO75223 188 aaKnown RBP10.42□□□□□ -0.74
TCOF1-215ENST00000515516 RBMXL2O75526 392 aaKnown RBP10.42□□□□□ -0.74
TCOF1-215ENST00000515516 HPRT1P00492 218 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 CSN3P07498 182 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 ZNF735P0CB33 412 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 IGHV4-30-4P0DP06 118 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 HIST1H1BP16401 226 aaKnown RBP10.42□□□□□ -0.74
TCOF1-215ENST00000515516 HLA-GP17693 338 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 RPS19P39019 145 aaKnown RBP10.42□□□□□ -0.74
TCOF1-215ENST00000515516 BRWD1-AS2P59051 145 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 TAS2R31P59538 309 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 AADACL3Q5VUY0 350 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 IL34Q6ZMJ4 242 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 TMEM17Q86X19 198 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 SAMD12Q8N8I0 201 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 YIPF6Q96EC8 236 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 TUBA4BQ9H853 241 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 BET1LQ9NYM9 111 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 EHFQ9NZC4 300 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 ADAM30Q9UKF2 790 aa10.42□□□□□ -0.74
TCOF1-215ENST00000515516 SMIM31A0A1B0GVY4 71 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 BMPR1BO00238 502 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 IL6RP08887 468 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-215ENST00000515516 NQO2P16083 231 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 PSMB6P28072 239 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 TGFBR1P36897 503 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 TAS2R46P59540 309 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 OR4A47Q6IF82 309 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 Q8N1Y9 231 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 DMBX1Q8NFW5 382 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 OR2K2Q8NGT1 345 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 OR5H2Q8NGV7 314 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 OR51H1Q8NH63 302 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 DYNLRB2Q8TF09 96 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 EEF1AKMT3Q96AZ1 226 aa10.41□□□□□ -0.74
TCOF1-215ENST00000515516 A8MZ25 164 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 CYB5BO43169 146 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 PMP2P02689 132 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 CRYGCP07315 174 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 PRSS3P35030 304 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 TAS2R20P59543 309 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 ERVK-16P61578 105 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 ZNF818PQ6ZRF7 136 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 CMTM1Q8IZ96 169 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 ZNF2Q9BSG1 426 aaPredicted RBP10.4□□□□□ -0.74
TCOF1-215ENST00000515516 COMMD5Q9GZQ3 224 aa10.4□□□□□ -0.74
TCOF1-215ENST00000515516 COL7A1Q02388 2944 aa10.4□□□□□ -0.75
TCOF1-215ENST00000515516 PPP5D1E7EU14 171 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 E7EUB6 86 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 UPK2O00526 184 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 NDUFB8O95169 186 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 OR2C1O95371 312 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 IGHV3-23P01764 117 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 AREGP15514 252 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 S100GP29377 79 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 ARL3P36405 182 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 RFX2P48378 723 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 FAM106AQ4KMX7 169 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 DHRS11Q6UWP2 260 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 CLEC19AQ6UXS0 136 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 OR6F1Q8NGZ6 308 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 SLC25A46Q96AG3 418 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 CXorf58Q96LI9 332 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 PLEKHA2Q9HB19 425 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms