RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 FAM106AQ4KMX7 169 aa11.26□□□□□ -0.61
DDR1-278ENST00000515233 ZNF57Q68EA5 555 aaPredicted RBP11.26□□□□□ -0.61
DDR1-278ENST00000515233 TMEM61Q8N0U2 210 aa11.26□□□□□ -0.61
DDR1-278ENST00000515233 PUSL1Q8N0Z8 303 aaKnown RBP11.26□□□□□ -0.61
DDR1-278ENST00000515233 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
DDR1-278ENST00000515233 OVOL2Q9BRP0 275 aa11.26□□□□□ -0.61
DDR1-278ENST00000515233 CCDC90BQ9GZT6 254 aa11.26□□□□□ -0.61
DDR1-278ENST00000515233 DCSTAMPQ9H295 470 aa11.26□□□□□ -0.61
DDR1-278ENST00000515233 ELF5Q9UKW6 265 aaPredicted RBP11.26□□□□□ -0.61
DDR1-278ENST00000515233 TMEM213A2RRL7 107 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 DPPA5A6NC42 116 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 J3QRK9 145 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 NDUFB8O95169 186 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 DHFRP00374 187 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 RAB3BP20337 219 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 NFYAP23511 347 aaPredicted RBP11.25□□□□□ -0.61
DDR1-278ENST00000515233 CRHBPP24387 322 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 RPL27AP46776 148 aaKnown RBP11.25□□□□□ -0.61
DDR1-278ENST00000515233 BRWD1-AS2P59051 145 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 EIF4EBP1Q13541 118 aaPredicted RBP11.25□□□□□ -0.61
DDR1-278ENST00000515233 ANKRD55Q3KP44 614 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 CDNFQ49AH0 187 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 CLEC19AQ6UXS0 136 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 VKORC1L1Q8N0U8 176 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 FYTTD1Q96QD9 318 aaKnown RBP11.25□□□□□ -0.61
DDR1-278ENST00000515233 HSD17B10Q99714 261 aaKnown RBP11.25□□□□□ -0.61
DDR1-278ENST00000515233 ST6GALNAC5Q9BVH7 336 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 MLXQ9UH92 298 aa11.25□□□□□ -0.61
DDR1-278ENST00000515233 LOC102724200A0A096LPH7 203 aaPredicted RBP11.24□□□□□ -0.61
DDR1-278ENST00000515233 A0A1B0GW64 132 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 HIST1H1BP16401 226 aaKnown RBP11.24□□□□□ -0.61
DDR1-278ENST00000515233 CTRB1P17538 263 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 PSMB6P28072 239 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 HACD4Q5VWC8 232 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 CTRB2Q6GPI1 263 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 OR4A47Q6IF82 309 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 CNIH2Q6PI25 160 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 C19orf35Q6ZS72 473 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 WFDC3Q8IUB2 231 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 MFSD4AQ8N468 514 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 UXS1Q8NBZ7 420 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 OR52B4Q8NGK2 314 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 CACNG8Q8WXS5 425 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 LINC00476Q8WZB0 136 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 EEF1AKMT3Q96AZ1 226 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 GGTLC1Q9BX51 225 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
DDR1-278ENST00000515233 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 TRAV25A0A0B4J276 109 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 IGKV1D-13A0A0B4J2D9 117 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 TRDV1A0A1B0GX56 115 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 ZNF320A2RRD8 509 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 IGHV3-23P01764 117 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 IGKV1-13P0DP09 117 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 GALP22466 123 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 MYL9P24844 172 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 AQP4P55087 323 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 TBCEQ15813 527 aaPredicted RBP11.23□□□□□ -0.61
DDR1-278ENST00000515233 OR2B11Q5JQS5 317 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 ZNF66Q6ZN08 573 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 MARC2Q969Z3 335 aa11.23□□□□□ -0.61
DDR1-278ENST00000515233 IGLV11-55A0A075B6I3 123 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 HRASP01112 189 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 CLEC3BP05452 202 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 AREGP15514 252 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 ZNF367Q7RTV3 350 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 NR2C2APQ86WQ0 139 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 TCTEX1D2Q8WW35 142 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 CXorf58Q96LI9 332 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 NDUFB11Q9NX14 153 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 MRPL27Q9P0M9 148 aaKnown RBP11.22□□□□□ -0.61
DDR1-278ENST00000515233 SPATA2Q9UM82 520 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 S4R3C0 116 aa11.22□□□□□ -0.61
DDR1-278ENST00000515233 CGB1A6NKQ9 187 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 SCAF4O95104 1147 aaKnown RBP11.21□□□□□ -0.61
DDR1-278ENST00000515233 ELLP55199 621 aaPredicted RBP11.21□□□□□ -0.61
DDR1-278ENST00000515233 RPL8P62917 257 aaKnown RBP11.21□□□□□ -0.61
DDR1-278ENST00000515233 TM4SF20Q53R12 229 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 OR4A5Q8NH83 315 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 NRG4Q8WWG1 115 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 AIFM2Q9BRQ8 373 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 BET1LQ9NYM9 111 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 ANXA10Q9UJ72 324 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 TP53TG1Q9Y2A0 90 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 SELENOKQ9Y6D0 94 aa11.21□□□□□ -0.61
DDR1-278ENST00000515233 SCGNO76038 276 aa11.2□□□□□ -0.62
DDR1-278ENST00000515233 DEFA4P12838 97 aa11.2□□□□□ -0.62
DDR1-278ENST00000515233 TNFRSF9Q07011 255 aa11.2□□□□□ -0.62
DDR1-278ENST00000515233 MSMO1Q15800 293 aa11.2□□□□□ -0.62
DDR1-278ENST00000515233 BTNL8Q6UX41 500 aa11.2□□□□□ -0.62
DDR1-278ENST00000515233 UNQ9165/PRO28630Q6UXU0 137 aa11.2□□□□□ -0.62
DDR1-278ENST00000515233 RBPMS2Q6ZRY4 209 aaKnown RBP11.2□□□□□ -0.62
DDR1-278ENST00000515233 Q6ZWC4 215 aa11.2□□□□□ -0.62
DDR1-278ENST00000515233 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 MFSD2BA6NFX1 497 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 LY6G6CO95867 125 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 HLA-GP17693 338 aa11.19□□□□□ -0.62
DDR1-278ENST00000515233 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms