RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 RCL1Q9Y2P8 373 aaKnown RBP10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 POMT1Q9Y6A1 747 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 FLNAP21333 2647 aaKnown RBP10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 CSPG4Q6UVK1 2322 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 HMSDA8MTL9 139 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 FAM90A26D6RGX4 464 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 ST8SIA3O43173 380 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 DEDDO75618 318 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 LGALS7P47929 136 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 S100A10P60903 97 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 RPS16P62249 146 aaKnown RBP10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 LAMTOR1Q6IAA8 161 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 TMEM65Q6PI78 240 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 BRD3OSQ6XYD6 125 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 GRPEL2Q8TAA5 225 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 THAP6Q8TBB0 222 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 RNF5Q99942 180 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 ZFP57Q9NU63 452 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 LSM5Q9Y4Y9 91 aaKnown RBP10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 TEX15Q9BXT5 2789 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 MYO9AB2RTY4 2548 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 FXYD6-FXYD2A0A087WZ82 144 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 FSHBP01225 129 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 PET100P0DJ07 73 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 UBE2KP61086 200 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 POLR2GP62487 172 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 EBI3Q14213 229 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 FBLN7Q53RD9 439 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 FOXRED2Q8IWF2 684 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 C9orf62Q8N4C0 152 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 HSPB7Q9UBY9 170 aa10.06□□□□□ -0.8
SNCAIP-221ENST00000515215 C15orf61A6NNL5 157 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 UPK2O00526 184 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 NXPH3O95157 252 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 IGKV1D-33P01593 117 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 IGKV1-33P01594 117 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 CRYGBP07316 175 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 CNTFRP26992 372 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 OR2B8PP59922 312 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 KRTAP1-1Q07627 177 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 ZNF429Q86V71 674 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 QTRT1Q9BXR0 403 aaKnown RBP10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 TNFSF18Q9UNG2 199 aa10.05□□□□□ -0.8
SNCAIP-221ENST00000515215 A0A0U1RQK1 487 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 RNF222A6NCQ9 220 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 ARPC5O15511 151 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 KBTBD11O94819 623 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 RLN2P04090 185 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 SNRNP70P08621 437 aaKnown RBP10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 TNFRSF9Q07011 255 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 MRGPRG-AS1Q2M3A8 158 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 LGALSLQ3ZCW2 172 aaPredicted RBP10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 PDLIM3Q53GG5 364 aaPredicted RBP10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 ZNF546Q86UE3 836 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 Q8N6K4 173 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 OR4A16Q8NH70 328 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 VSTM2AQ8TAG5 236 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 EAF1Q96JC9 268 aaPredicted RBP10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 TSNAXQ99598 290 aaKnown RBP10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 MAGT1Q9H0U3 335 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 MEGF9Q9H1U4 602 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 FOXA2Q9Y261 457 aaPredicted RBP10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 NOTCH2Q04721 2471 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 SYNGR2O43760 224 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 SLC25A17O43808 307 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 TMEM50AO95807 157 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 MOSP00540 346 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 CXCL2P19875 107 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 CD24P25063 80 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 PSG5Q15238 335 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 VMA21Q3ZAQ7 101 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 TEX45Q8NA69 505 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 OR2T10Q8NGZ9 312 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 OR4A5Q8NH83 315 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 DCUN1D4Q92564 292 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 SOX21Q9Y651 276 aaPredicted RBP10.04□□□□□ -0.8
SNCAIP-221ENST00000515215 PLXNB1O43157 2135 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 MSGN1A6NI15 193 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 E5RGE8 158 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 KCNAB3O43448 404 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 CHST1O43916 411 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 SSSCA1O60232 199 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 RBMXL2O75526 392 aaKnown RBP10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 SNAPC5O75971 98 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 NDUFA3O95167 84 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 SPDEFO95238 335 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 FGF2P09038 288 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 DYNLT3P51808 116 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 F2RL1P55085 397 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 PAX9P55771 341 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 THNSL2Q86YJ6 484 aa10.03□□□□□ -0.8
SNCAIP-221ENST00000515215 NPBQ8NG41 125 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms