RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 GCSHP23434 173 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 DNM1P46Q6ZS02 220 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 OR5AC2Q9NZP5 309 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 H7C2G1 150 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 ZNF818PQ6ZRF7 136 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 STPG3Q8N7X2 389 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 A0A0B4J293 547 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 KLRD1Q13241 179 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 HERPUD1Q15011 391 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 PPP1R27Q86WC6 154 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 G6PC2Q9NQR9 355 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 E9PLN8 166 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 M0R3E3 92 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 TOMM20LQ6UXN7 152 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 VKORC1Q9BQB6 163 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 PKIBQ9C010 78 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 IGHV1-18A0A0C4DH31 117 aa12.19□□□□□ -0.46
TRIO-222ENST00000515144 MUC6Q6W4X9 2439 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 EFEMP2O95967 443 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 IGHMP01871 453 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 ARL14EPLP0DKL9 152 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 VAX2Q9UIW0 290 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 MAS1LP35410 378 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 DLK1P80370 383 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 MARVELD1Q9BSK0 173 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 DPM3Q9P2X0 92 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 ZNF729A6NN14 1252 aaPredicted RBP12.18□□□□□ -0.46
TRIO-222ENST00000515144 VAMP3Q15836 100 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 SRSF7Q16629 238 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRIO-222ENST00000515144 ASPHD2Q6ICH7 369 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 OR1N2Q8NGR9 330 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 NTN3O00634 580 aaPredicted RBP12.18□□□□□ -0.46
TRIO-222ENST00000515144 ARPC1AQ92747 370 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 TMEM186Q96B77 213 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 DUX3Q96PT4 197 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 LINC00470Q9BZP3 86 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 PSMB11A5LHX3 300 aa12.18□□□□□ -0.46
TRIO-222ENST00000515144 NPIPB3Q92617 1050 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 MAP1LC3CQ9BXW4 147 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 FBXL7Q9UJT9 491 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 H3BVH4 76 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 STHQ8IWL8 128 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 ATP6V0CP27449 155 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 GTSCR1Q86UQ5 136 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 ZNF502Q8TBZ5 544 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 AQP3Q92482 292 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 NAT8Q9UHE5 227 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 KIAA1549Q9HCM3 1950 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 APCSP02743 223 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 MUC21Q5SSG8 566 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 C1QTNF12Q5T7M4 302 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 BRD3OSQ6XYD6 125 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 SLC25A28Q96A46 364 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 MIEN1Q9BRT3 115 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 CORTO00230 105 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 ZNF324O75467 553 aaPredicted RBP12.17□□□□□ -0.46
TRIO-222ENST00000515144 SP5Q6BEB4 398 aaPredicted RBP12.17□□□□□ -0.46
TRIO-222ENST00000515144 HSPB7Q9UBY9 170 aa12.17□□□□□ -0.46
TRIO-222ENST00000515144 NUDT3O95989 172 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 RNASE4P34096 147 aaKnown RBP12.16□□□□□ -0.46
TRIO-222ENST00000515144 RNF212Q495C1 297 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 MSGN1A6NI15 193 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 PHOX2AO14813 284 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 PDE6DO43924 150 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 KLF7O75840 302 aaPredicted RBP12.16□□□□□ -0.46
TRIO-222ENST00000515144 PRB1P04280 392 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 FAM209AQ5JX71 171 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 LINC00305Q7Z4B0 112 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 CRIM1Q9NZV1 1036 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 PITX3O75364 302 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 BPIFA4PQ86YQ2 179 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 TBX15Q96SF7 602 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 NPIPB8E9PQR5 432 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 SEMA5BQ9P283 1151 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 SELENOHQ8IZQ5 122 aaKnown RBP12.16□□□□□ -0.46
TRIO-222ENST00000515144 GPR146Q96CH1 333 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 JPT1Q9UK76 154 aa12.16□□□□□ -0.46
TRIO-222ENST00000515144 SNURFLB1AK76 121 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 CD300CQ08708 224 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 ZIC4Q8N9L1 334 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 MUC1P15941 1255 aaPredicted RBP12.15□□□□□ -0.46
TRIO-222ENST00000515144 CYB5R2Q6BCY4 276 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 LINC01587Q99440 93 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 NDUFB4O95168 129 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 RPL29P47914 159 aaKnown RBP12.15□□□□□ -0.46
TRIO-222ENST00000515144 FAM159AQ6UWV7 190 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 C8orf46Q8TAG6 207 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 MRPL20Q9BYC9 149 aaKnown RBP12.15□□□□□ -0.46
TRIO-222ENST00000515144 ZNF430Q9H8G1 570 aaPredicted RBP12.15□□□□□ -0.46
TRIO-222ENST00000515144 MEOX2P50222 304 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 DLX6P56179 175 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 SURF2Q15527 256 aaPredicted RBP12.15□□□□□ -0.46
TRIO-222ENST00000515144 BSXQ3C1V8 233 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 CRIPAKQ8N1N5 446 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 ARPC4-TTLL3A0A0A6YYG9 625 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 DLX1P56177 255 aa12.15□□□□□ -0.46
TRIO-222ENST00000515144 TNFRSF9Q07011 255 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms