RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 E7EUB6 86 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 BMPR1BO00238 502 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 RBFOX2O43251 390 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 TNFSF12O43508 249 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 IL6RP08887 468 aaPredicted RBP7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 ZNF735P0CB33 412 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 RPS19P39019 145 aaKnown RBP7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 RPL27AP46776 148 aaKnown RBP7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 RPEL1Q2QD12 228 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 ZNF818PQ6ZRF7 136 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 SLC25A42Q86VD7 318 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 SBSPONQ8IVN8 264 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 NECAP1Q8NC96 275 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 TSPAN14Q8NG11 270 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 GIMAP1Q8WWP7 306 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 SLC5A7Q9GZV3 580 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 VCX3AQ9NNX9 186 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 BET1LQ9NYM9 111 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 ZNF257Q9Y2Q1 563 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 MEIS3P1A6NDR6 274 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 A8MZ25 164 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 HRASP01112 189 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 FCER2P06734 321 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 CSN3P07498 182 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 IGHV4-30-4P0DP06 118 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 TAS2R20P59543 309 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 FXYD4P59646 89 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 RPL8P62917 257 aaKnown RBP7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 ATP5G2Q06055 141 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 CATR1Q13166 79 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 POU2AF1Q16633 256 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 KLK9Q2XQG4 91 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 C15orf32Q32M92 178 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 FAM209BQ5JX69 171 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 C19orf35Q6ZS72 473 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 SSX9Q7RTT3 188 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 SPAG16Q8N0X2 631 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 Q8N1Y9 231 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 SAMD12Q8N8I0 201 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 OR4A5Q8NH83 315 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 S100A16Q96FQ6 103 aaKnown RBP7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 THAP7Q9BT49 309 aaPredicted RBP7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 IFT46Q9NQC8 304 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 SLC2A9Q9NRM0 540 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 KLK9Q9UKQ9 250 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 DMRT1Q9Y5R6 373 aa7.96□□□□□ -1.14
HMGXB3-205ENST00000514469 CGB1A6NKQ9 187 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 H0Y980 276 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 SULT1C2O00338 296 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 OR2J3O76001 311 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 HPRT1P00492 218 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 CRYGCP07315 174 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 FGF2P09038 288 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 AREGP15514 252 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 CTRB1P17538 263 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 HLA-GP17693 338 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 NAT1P18440 290 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 TAS2R31P59538 309 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 LSM3P62310 102 aaKnown RBP7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 TATDN3Q17R31 274 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 TMEM69Q5SWH9 247 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 CTRB2Q6GPI1 263 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 OR4A47Q6IF82 309 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 LCN12Q6JVE5 192 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 TMEM17Q86X19 198 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 Q8N402 240 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 SLC25A46Q96AG3 418 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 RCHY1Q96PM5 261 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 FANCD2OSQ96PS1 177 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 FYTTD1Q96QD9 318 aaKnown RBP7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 C19orf73Q9NVV2 129 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 EHFQ9NZC4 300 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 PEMTQ9UBM1 199 aa7.95□□□□□ -1.14
HMGXB3-205ENST00000514469 DPPA5A6NC42 116 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 PPP5D1E7EU14 171 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 MYOD1P15172 320 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 NQO2P16083 231 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 PSMB6P28072 239 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 GNRHRP30968 328 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 MECP2P51608 486 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 HERV-K104P61576 105 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 DHRS11Q6UWP2 260 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 ADAMTSL5Q6ZMM2 481 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 SGPP2Q8IWX5 399 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 OR2K2Q8NGT1 345 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 OR51H1Q8NH63 302 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 BORCS5Q969J3 196 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 MOB3AQ96BX8 217 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 KCTD12Q96CX2 325 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 CCDC140Q96MF4 163 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 TM2D3Q9BRN9 247 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 AIFM2Q9BRQ8 373 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 FXYD6Q9H0Q3 95 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 COMMD9Q9P000 198 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 FBXL7Q9UJT9 491 aa7.94□□□□□ -1.14
HMGXB3-205ENST00000514469 DYNC2H1Q8NCM8 4307 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 IGLV11-55A0A075B6I3 123 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 IZUMO1RA6ND01 250 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 UPK2O00526 184 aa7.93□□□□□ -1.14
HMGXB3-205ENST00000514469 S1PR2O95136 353 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms