RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SRRM4A7MD48 611 aaKnown RBP12.16□□□□□ -0.46
VCAN-211ENST00000513984 AGPAT2O15120 278 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 APOC3P02656 99 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 PPIAL4GP0DN37 164 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 ADCYAP1P18509 176 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 DVL1P1P54792 670 aaPredicted RBP12.16□□□□□ -0.46
VCAN-211ENST00000513984 HSPE1P61604 102 aaKnown RBP12.16□□□□□ -0.46
VCAN-211ENST00000513984 SERF2P84101 59 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 TMEM177Q53S58 311 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 C10orf91Q5T1B1 145 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 PDPNQ86YL7 162 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 LY6G5BQ8NDX9 201 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 LFNGQ8NES3 379 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 PCGF1Q9BSM1 259 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 BET1LQ9NYM9 111 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 PRNDQ9UKY0 176 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 FAM96BQ9Y3D0 163 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 FBXO7Q9Y3I1 522 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 TIMM9Q9Y5J7 89 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 IGHV2-26A0A0B4J1V2 119 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 A6NNC1 897 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 RNASEK-C17orf49H0YIS7 233 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 UPK2O00526 184 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 IL3RAP26951 378 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
VCAN-211ENST00000513984 SCRT1Q9BWW7 348 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 UBTD1Q9HAC8 227 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 PATZ1Q9HBE1 687 aaKnown RBP12.15□□□□□ -0.46
VCAN-211ENST00000513984 HEYLQ9NQ87 328 aaPredicted RBP12.15□□□□□ -0.46
VCAN-211ENST00000513984 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
VCAN-211ENST00000513984 IGLV1-47P01700 117 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 SAA1P0DJI8 122 aaPredicted RBP12.14□□□□□ -0.47
VCAN-211ENST00000513984 REG1BP48304 166 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 HOXA1P49639 335 aaPredicted RBP12.14□□□□□ -0.47
VCAN-211ENST00000513984 CENPVQ7Z7K6 275 aaPredicted RBP12.14□□□□□ -0.47
VCAN-211ENST00000513984 RBMXL1Q96E39 390 aaKnown RBP12.14□□□□□ -0.47
VCAN-211ENST00000513984 HARBI1Q96MB7 349 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 CARHSP1Q9Y2V2 147 aaKnown RBP12.14□□□□□ -0.47
VCAN-211ENST00000513984 ARHGAP32A7KAX9 2087 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 BTBD17A6NE02 478 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 C22orf46C9J442 243 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 FAM157AC9JC47 383 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 H7C2Y5 167 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 LIPFP07098 398 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 MDKP21741 143 aaPredicted RBP12.14□□□□□ -0.47
VCAN-211ENST00000513984 TLE4Q04727 773 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 HLA-DRB5Q30154 266 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 SPSB3Q6PJ21 355 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 TGIF2LXQ8IUE1 241 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 BEND2Q8NDZ0 799 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 OR4C13Q8NGP0 309 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 FLYWCH2Q96CP2 140 aaKnown RBP12.14□□□□□ -0.47
VCAN-211ENST00000513984 CLEC7AQ9BXN2 247 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 SEC11CQ9BY50 192 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 WASHC3Q9Y3C0 194 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 OR51B2Q9Y5P1 312 aa12.14□□□□□ -0.47
VCAN-211ENST00000513984 USP24Q9UPU5 2620 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 CFAP46Q8IYW2 2715 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 CACNA1BQ00975 2339 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 A0A1B0GW64 132 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 KBTBD11O94819 623 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 IFNA10P01566 189 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 H2AFB1P0C5Y9 115 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 CDKN1AP38936 164 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 RAB13P51153 203 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 PRRX1P54821 245 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 GUK1Q16774 197 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 LHX4Q969G2 390 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 MS4A7Q9GZW8 240 aaPredicted RBP12.13□□□□□ -0.47
VCAN-211ENST00000513984 FKBP11Q9NYL4 201 aa12.13□□□□□ -0.47
VCAN-211ENST00000513984 hCG_1809904A0A1W2PP81 198 aa12.12□□□□□ -0.47
VCAN-211ENST00000513984 A0A1W2PPE2 198 aa12.12□□□□□ -0.47
VCAN-211ENST00000513984 A0A1W2PR64 198 aa12.12□□□□□ -0.47
VCAN-211ENST00000513984 A0A1W2PRV1 198 aa12.12□□□□□ -0.47
VCAN-211ENST00000513984 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
VCAN-211ENST00000513984 RPS16P62249 146 aaKnown RBP12.12□□□□□ -0.47
VCAN-211ENST00000513984 PRCDQ00LT1 54 aa12.12□□□□□ -0.47
VCAN-211ENST00000513984 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
VCAN-211ENST00000513984 RPRMQ9NS64 109 aa12.12□□□□□ -0.47
VCAN-211ENST00000513984 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 C9JQL5 133 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 F8W036 122 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 RRHO14718 337 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 GOSR1O95249 250 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 FGF7P21781 194 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 MC5RP33032 325 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 OR5B3Q8NH48 314 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 OR4A5Q8NH83 315 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 PBDC1Q9BVG4 233 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 GGACTQ9BVM4 153 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 SSBP3Q9BWW4 388 aaPredicted RBP12.11□□□□□ -0.47
VCAN-211ENST00000513984 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 ENY2Q9NPA8 101 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 HBE1P02100 147 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 SFTA3P0C7M3 94 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 MYOD1P15172 320 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms