RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CDK10Q15131 360 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 KLK9Q2XQG4 91 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 CD300EQ496F6 205 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-216ENST00000512683 IDNKQ5T6J7 187 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 VSTM2AQ8TAG5 236 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 AIFM2Q9BRQ8 373 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 ZC4H2Q9NQZ6 224 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 ZNF257Q9Y2Q1 563 aa9.5□□□□□ -0.89
VEGFA-216ENST00000512683 RBMX2Q9Y388 322 aaKnown RBP9.5□□□□□ -0.89
VEGFA-216ENST00000512683 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
VEGFA-216ENST00000512683 LYSTQ99698 3801 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 STARD9Q9P2P6 4700 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 IZUMO1RA6ND01 250 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 OR11H12B2RN74 326 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 FCGR3BO75015 233 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 DHFRP00374 187 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 SAA1P0DJI8 122 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-216ENST00000512683 PTHLHP12272 177 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 MAS1LP35410 378 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 TGFBR1P36897 503 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 CD81P60033 236 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 DEFA5Q01523 94 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
VEGFA-216ENST00000512683 ANKRD55Q3KP44 614 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 ADAMTSL5Q6ZMM2 481 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 KCTD9Q7L273 389 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 SLC16A13Q7RTY0 426 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 GVQW1Q8N7I0 195 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 DYNLRB2Q8TF09 96 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 ACOT12Q8WYK0 555 aa9.49□□□□□ -0.89
VEGFA-216ENST00000512683 ZNF430Q9H8G1 570 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-216ENST00000512683 GAR1Q9NY12 217 aaKnown RBP9.49□□□□□ -0.89
VEGFA-216ENST00000512683 MRPS7Q9Y2R9 242 aaKnown RBP9.49□□□□□ -0.89
VEGFA-216ENST00000512683 A0A0A6YYH2 397 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 A6NJ64 397 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 C2orf70A6NJV1 201 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 NPIPB5A8MRT5 1133 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 CRYGCP07315 174 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 FOLR2P14207 255 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 HIST1H1BP16401 226 aaKnown RBP9.48□□□□□ -0.89
VEGFA-216ENST00000512683 ZNF45Q02386 682 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 C15orf32Q32M92 178 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 FAM106AQ4KMX7 169 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 OR4A47Q6IF82 309 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 HOGA1Q86XE5 327 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 BEST4Q8NFU0 473 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 GPHA2Q96T91 129 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
VEGFA-216ENST00000512683 AUNIPQ9H7T9 357 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 SLC2A9Q9NRM0 540 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 ADAM30Q9UKF2 790 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 SPATA2Q9UM82 520 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 DMRT1Q9Y5R6 373 aa9.48□□□□□ -0.89
VEGFA-216ENST00000512683 RBMY1BA6NDE4 496 aaKnown RBP9.47□□□□□ -0.89
VEGFA-216ENST00000512683 RBMY1EA6NEQ0 496 aaKnown RBP9.47□□□□□ -0.89
VEGFA-216ENST00000512683 RBMY1DP0C7P1 496 aaKnown RBP9.47□□□□□ -0.89
VEGFA-216ENST00000512683 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
VEGFA-216ENST00000512683 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
VEGFA-216ENST00000512683 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
VEGFA-216ENST00000512683 MARC2Q969Z3 335 aa9.47□□□□□ -0.89
VEGFA-216ENST00000512683 YIPF6Q96EC8 236 aa9.47□□□□□ -0.89
VEGFA-216ENST00000512683 OR2A7Q96R45 310 aa9.47□□□□□ -0.89
VEGFA-216ENST00000512683 DCUN1D5Q9BTE7 237 aa9.47□□□□□ -0.89
VEGFA-216ENST00000512683 PLEKHA3Q9HB20 300 aa9.47□□□□□ -0.89
VEGFA-216ENST00000512683 TRAV25A0A0B4J276 109 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 DPPA5A6NC42 116 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 E7EUB6 86 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 TMEM127O75204 238 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 PRH1P02810 166 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 CD7P09564 240 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 CBLN1P23435 193 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 PSMB6P28072 239 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 FCGR2CP31995 323 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 RPS19P39019 145 aaKnown RBP9.46□□□□□ -0.9
VEGFA-216ENST00000512683 MSMO1Q15800 293 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 GUCA2BQ16661 112 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 PUSL1Q8N0Z8 303 aaKnown RBP9.46□□□□□ -0.9
VEGFA-216ENST00000512683 DEFB125Q8N687 156 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 OR4S2Q8NH73 311 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 TMEM167AQ8TBQ9 72 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 TCTEX1D2Q8WW35 142 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 FYTTD1Q96QD9 318 aaKnown RBP9.46□□□□□ -0.9
VEGFA-216ENST00000512683 SRD5A3Q9H8P0 318 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 DIABLOQ9NR28 239 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 CCL28Q9NRJ3 127 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 TAS2R8Q9NYW2 309 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 FBXL7Q9UJT9 491 aa9.46□□□□□ -0.9
VEGFA-216ENST00000512683 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 A0A1B0GW64 132 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 XRCC3O43542 346 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 OR2J3O76001 311 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 OR2C1O95371 312 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 HRASP01112 189 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 PPYP01298 95 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 FCER2P06734 321 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 FGF2P09038 288 aa9.45□□□□□ -0.9
VEGFA-216ENST00000512683 ZNF735P0CB33 412 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms