RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CD3GP09693 182 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 CD1BP29016 333 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 BTCP35070 178 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 MECP2P51608 486 aaKnown RBP6.84□□□□□ -1.31
NUP54-211ENST00000512151 MRPS10P82664 201 aaKnown RBP6.84□□□□□ -1.31
NUP54-211ENST00000512151 DYRK1AQ13627 763 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 RNASE12Q5GAN4 147 aaKnown RBP6.84□□□□□ -1.31
NUP54-211ENST00000512151 LCN12Q6JVE5 192 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 TOMM5Q8N4H5 51 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 GVQW1Q8N7I0 195 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 MAPKAPK5-AS1Q8N8E1 139 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 GPX8Q8TED1 209 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 RITA1Q96K30 269 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 RHOVQ96L33 236 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 LINC00574Q9H8X3 128 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 Q9N2K0 584 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 TRAPPC2LQ9UL33 140 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 A0A1W2PN81 502 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 MSGN1A6NI15 193 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 ZNF785A8K8V0 405 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 NPIPB11E5RHQ5 1161 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 INMT-MINDY4F8WBC2 141 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 GABARAPH6UMI1 98 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 SCTP09683 121 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 GSTT2P0CG29 244 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 GSTT2BP0CG30 244 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 PRSS3P35030 304 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 SSTR5P35346 364 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 CHRNA7P36544 502 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 GLP1RP43220 463 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 GNG2P59768 71 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 KLF9Q13886 244 aaPredicted RBP6.83□□□□□ -1.32
NUP54-211ENST00000512151 KLF5Q13887 457 aaPredicted RBP6.83□□□□□ -1.32
NUP54-211ENST00000512151 ARL6IP1Q15041 203 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 HMGN3Q15651 99 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 TATDN3Q17R31 274 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 ECSCRQ19T08 205 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 OR8H1Q8NGG4 311 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 OR9G4Q8NGQ1 327 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 OR52I2Q8NH67 350 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 OR1L1Q8NH94 360 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 RTN4IP1Q8WWV3 396 aaPredicted RBP6.83□□□□□ -1.32
NUP54-211ENST00000512151 TAF9BQ9HBM6 251 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 CHMP1AQ9HD42 196 aaPredicted RBP6.83□□□□□ -1.32
NUP54-211ENST00000512151 C12orf4Q9NQ89 552 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 COPZ2Q9P299 210 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 KLK11Q9UBX7 282 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 PAIP2BQ9ULR5 123 aaKnown RBP6.83□□□□□ -1.32
NUP54-211ENST00000512151 ANAPC10Q9UM13 185 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 NUBP2Q9Y5Y2 271 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 ALG5Q9Y673 324 aa6.83□□□□□ -1.32
NUP54-211ENST00000512151 IGKV1-6A0A0C4DH72 117 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 C7orf66A4D0T2 115 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 NAP1L6A6NFF2 107 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 OR11H12B2RN74 326 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 SYNJ2BPP57105 145 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 AP3S2P59780 193 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 HLA-DRB3P79483 266 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 HOGA1Q86XE5 327 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 PRR18Q8N4B5 295 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 ZNF565Q8N9K5 539 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 SNAPC3Q92966 411 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 ARL11Q969Q4 196 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 MS4A10Q96PG2 267 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 RIMS4Q9H426 269 aaPredicted RBP6.82□□□□□ -1.32
NUP54-211ENST00000512151 FOXA2Q9Y261 457 aaPredicted RBP6.82□□□□□ -1.32
NUP54-211ENST00000512151 RBMX2Q9Y388 322 aaKnown RBP6.82□□□□□ -1.32
NUP54-211ENST00000512151 IGHV3-43A0A0B4J1X8 118 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 TRDCB7Z8K6 153 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 SULT1C2O00338 296 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 DHFRP00374 187 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 HLA-DRB1P01911 266 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 HBZP02008 142 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 TCRBP04435 133 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 IGHV3-43DP0DP04 118 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 EGR2P11161 476 aaPredicted RBP6.82□□□□□ -1.32
NUP54-211ENST00000512151 NAT1P18440 290 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 GZMHP20718 246 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 DTYMKP23919 212 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 RRAS2P62070 204 aaPredicted RBP6.82□□□□□ -1.32
NUP54-211ENST00000512151 GNMTQ14749 295 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 MMDQ15546 238 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 IGSF11Q5DX21 431 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 Q6ZS49 121 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 WFDC3Q8IUB2 231 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 TCTE3Q8IZS6 198 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 OR52L2PQ8NGH6 319 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 FCAMRQ8WWV6 532 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 ZNF486Q96H40 463 aaPredicted RBP6.82□□□□□ -1.32
NUP54-211ENST00000512151 MTFP1Q9UDX5 166 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 SLC23A1Q9UHI7 598 aa6.82□□□□□ -1.32
NUP54-211ENST00000512151 ANKRD20A5PA0PJZ0 165 aa6.81□□□□□ -1.32
NUP54-211ENST00000512151 ANKRD34BA5PLL1 514 aa6.81□□□□□ -1.32
NUP54-211ENST00000512151 ARPC1BO15143 372 aaKnown RBP6.81□□□□□ -1.32
NUP54-211ENST00000512151 SLC31A2O15432 143 aa6.81□□□□□ -1.32
NUP54-211ENST00000512151 ATF4P18848 351 aaPredicted RBP6.81□□□□□ -1.32
NUP54-211ENST00000512151 CRIP2P52943 208 aaPredicted RBP6.81□□□□□ -1.32
NUP54-211ENST00000512151 MRPS15P82914 257 aaKnown RBP6.81□□□□□ -1.32
NUP54-211ENST00000512151 CD300EQ496F6 205 aaPredicted RBP6.81□□□□□ -1.32
NUP54-211ENST00000512151 ZFP69Q49AA0 526 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms