RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 S1PR2O95136 353 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 RLN1P04808 185 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 IL6RP08887 468 aaPredicted RBP12.68□□□□□ -0.38
DDX41-213ENST00000512027 RPA2P15927 270 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 KIR2DS2P43631 304 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 TAS2R46P59540 309 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 ZNF45Q02386 682 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 AADACL3Q5VUY0 350 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 DHRS11Q6UWP2 260 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 HAPLN4Q86UW8 402 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 CLVS1Q8IUQ0 354 aaPredicted RBP12.68□□□□□ -0.38
DDX41-213ENST00000512027 ZBTB34Q8NCN2 500 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 TMEM167AQ8TBQ9 72 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 MOB3AQ96BX8 217 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 TMEM68Q96MH6 324 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 CMTM3Q96MX0 182 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 FYTTD1Q96QD9 318 aaKnown RBP12.68□□□□□ -0.38
DDX41-213ENST00000512027 ADAM30Q9UKF2 790 aa12.68□□□□□ -0.38
DDX41-213ENST00000512027 TRAV3A0A0B4J244 114 aa12.67□□□□□ -0.38
DDX41-213ENST00000512027 CREBL2O60519 120 aaPredicted RBP12.67□□□□□ -0.38
DDX41-213ENST00000512027 ZNF182P17025 639 aaPredicted RBP12.67□□□□□ -0.38
DDX41-213ENST00000512027 CATR1Q13166 79 aa12.67□□□□□ -0.38
DDX41-213ENST00000512027 OR4A47Q6IF82 309 aa12.67□□□□□ -0.38
DDX41-213ENST00000512027 MZT2AQ6P582 158 aa12.67□□□□□ -0.38
DDX41-213ENST00000512027 A0A0G2JLM5 398 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 M0QYG6 137 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 HRASP01112 189 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 RPL27AP46776 148 aaKnown RBP12.66□□□□□ -0.38
DDX41-213ENST00000512027 RHOGP84095 191 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 VSTM2AQ8TAG5 236 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 AP3S1Q92572 193 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 SPIN2AQ99865 258 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 SPIN2BQ9BPZ2 258 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 MIXL1Q9H2W2 232 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 SCPEP1Q9HB40 452 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 AKIP1Q9NQ31 210 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 EXTL2Q9UBQ6 330 aa12.66□□□□□ -0.38
DDX41-213ENST00000512027 CGB1A6NKQ9 187 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX41-213ENST00000512027 PGLYRP1O75594 196 aaPredicted RBP12.65□□□□□ -0.38
DDX41-213ENST00000512027 LY86O95711 162 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 REG1AP05451 166 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 AREGP15514 252 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 RCVRNP35243 200 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 PHLDA2Q53GA4 152 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 ACSM6Q6P461 480 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 TTC9CQ8N5M4 171 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 RANGRFQ9HD47 186 aaPredicted RBP12.65□□□□□ -0.38
DDX41-213ENST00000512027 HRASLSQ9HDD0 168 aa12.65□□□□□ -0.38
DDX41-213ENST00000512027 CTDSP2O14595 271 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 OR2J3O76001 311 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 BRI3O95415 125 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 HPRT1P00492 218 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 TAS2R31P59538 309 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 TSPAN5P62079 268 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 RPL8P62917 257 aaKnown RBP12.64□□□□□ -0.39
DDX41-213ENST00000512027 EXOSC2Q13868 293 aaKnown RBP12.64□□□□□ -0.39
DDX41-213ENST00000512027 C11orf87Q6NUJ2 197 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 ZNF343Q6P1L6 599 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 ZNF429Q86V71 674 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 LAX1Q8IWV1 398 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 BET1LQ9NYM9 111 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 KLK11Q9UBX7 282 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 ZNF256Q9Y2P7 627 aaPredicted RBP12.64□□□□□ -0.39
DDX41-213ENST00000512027 SORL1Q92673 2214 aa12.64□□□□□ -0.39
DDX41-213ENST00000512027 TRBV9A0A0B4J1U6 114 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 GPR31O00270 319 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 ZNF735P0CB33 412 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 NQO2P16083 231 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 HLA-GP17693 338 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 MAS1LP35410 378 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 INSL3P51460 131 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 DMBX1Q8NFW5 382 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 FCAMRQ8WWV6 532 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 USMG5Q96IX5 58 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 ABHD1Q96SE0 405 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 PEF1Q9UBV8 284 aaKnown RBP12.63□□□□□ -0.39
DDX41-213ENST00000512027 S4R3C0 116 aa12.63□□□□□ -0.39
DDX41-213ENST00000512027 DPPA5A6NC42 116 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 UPK2O00526 184 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 RGS5O15539 181 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 IGHV3-23P01764 117 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 SPNP16150 400 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 F2RP25116 425 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 LPAR6P43657 344 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 SYNJ2BPP57105 145 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 POU2AF1Q16633 256 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 RSRP1Q9BUV0 290 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 PLEKHA2Q9HB19 425 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 SLC2A9Q9NRM0 540 aa12.62□□□□□ -0.39
DDX41-213ENST00000512027 ZMAT5Q9UDW3 170 aaKnown RBP12.62□□□□□ -0.39
DDX41-213ENST00000512027 LSM4Q9Y4Z0 139 aaKnown RBP12.62□□□□□ -0.39
DDX41-213ENST00000512027 FAM223BA6NKX1 122 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 NPIPB5A8MRT5 1133 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 BMPR1BO00238 502 aa12.61□□□□□ -0.39
DDX41-213ENST00000512027 CD3DP04234 171 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms