RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TMEM167AQ8TBQ9 72 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 GPX8Q8TED1 209 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 MOB3AQ96BX8 217 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 FYTTD1Q96QD9 318 aaKnown RBP10.21□□□□□ -0.77
RNF4-215ENST00000511843 OR2A7Q96R45 310 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 TRAV3A0A0B4J244 114 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 A0A0G2JLM5 398 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 SMIM31A0A1B0GVY4 71 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 TEX22C9J3V5 150 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 S1PR2O95136 353 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 RLN1P04808 185 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 IL6RP08887 468 aaPredicted RBP10.2□□□□□ -0.78
RNF4-215ENST00000511843 KIR2DS2P43631 304 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 RPL27AP46776 148 aaKnown RBP10.2□□□□□ -0.78
RNF4-215ENST00000511843 TAS2R46P59540 309 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 RHOGP84095 191 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 SPCS2Q15005 226 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 MSMO1Q15800 293 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 C11orf87Q6NUJ2 197 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 ACSM6Q6P461 480 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 DHRS11Q6UWP2 260 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 ZBTB34Q8NCN2 500 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 TMEM68Q96MH6 324 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 SPIN2AQ99865 258 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 SPIN2BQ9BPZ2 258 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 AKIP1Q9NQ31 210 aa10.2□□□□□ -0.78
RNF4-215ENST00000511843 M0QYG6 137 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 CREBL2O60519 120 aaPredicted RBP10.19□□□□□ -0.78
RNF4-215ENST00000511843 HRASP01112 189 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 REG1AP05451 166 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 AREGP15514 252 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 CATR1Q13166 79 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 ZNF343Q6P1L6 599 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 GPR141Q7Z602 305 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 VSTM2AQ8TAG5 236 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 RSRP1Q9BUV0 290 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 HRASLSQ9HDD0 168 aa10.19□□□□□ -0.78
RNF4-215ENST00000511843 ZNF256Q9Y2P7 627 aaPredicted RBP10.19□□□□□ -0.78
RNF4-215ENST00000511843 CGB1A6NKQ9 187 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 PGLYRP1O75594 196 aaPredicted RBP10.18□□□□□ -0.78
RNF4-215ENST00000511843 OR2J3O76001 311 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 SPNP16150 400 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 ZNF182P17025 639 aaPredicted RBP10.18□□□□□ -0.78
RNF4-215ENST00000511843 SYNJ2BPP57105 145 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 RPL8P62917 257 aaKnown RBP10.18□□□□□ -0.78
RNF4-215ENST00000511843 CD69Q07108 199 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 EXOSC2Q13868 293 aaKnown RBP10.18□□□□□ -0.78
RNF4-215ENST00000511843 PHLDA2Q53GA4 152 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 MZT2AQ6P582 158 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 ZNF429Q86V71 674 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 TTC9CQ8N5M4 171 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 OR6F1Q8NGZ6 308 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 CMTM3Q96MX0 182 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 MIXL1Q9H2W2 232 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 RANGRFQ9HD47 186 aaPredicted RBP10.18□□□□□ -0.78
RNF4-215ENST00000511843 EXTL2Q9UBQ6 330 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 PEF1Q9UBV8 284 aaKnown RBP10.18□□□□□ -0.78
RNF4-215ENST00000511843 LSM4Q9Y4Z0 139 aaKnown RBP10.18□□□□□ -0.78
RNF4-215ENST00000511843 S4R3C0 116 aa10.18□□□□□ -0.78
RNF4-215ENST00000511843 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 TRBV9A0A0B4J1U6 114 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 DPPA5A6NC42 116 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 RBFOX2O43251 390 aaKnown RBP eCLIP10.17□□□□□ -0.78
RNF4-215ENST00000511843 BRI3O95415 125 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 HPRT1P00492 218 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 IGHV3-23P01764 117 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 ZNF735P0CB33 412 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 HLA-GP17693 338 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 ZP3P21754 424 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 RCVRNP35243 200 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 INSL3P51460 131 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 TSPAN5P62079 268 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 CLVS1Q8IUQ0 354 aaPredicted RBP10.17□□□□□ -0.78
RNF4-215ENST00000511843 DMBX1Q8NFW5 382 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 OR52I2Q8NH67 350 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 AP3S1Q92572 193 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 B9D2Q9BPU9 175 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 SCPEP1Q9HB40 452 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 BET1LQ9NYM9 111 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 KLK11Q9UBX7 282 aa10.17□□□□□ -0.78
RNF4-215ENST00000511843 ZMAT5Q9UDW3 170 aaKnown RBP10.17□□□□□ -0.78
RNF4-215ENST00000511843 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 GPR31O00270 319 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 UPK2O00526 184 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 NQO2P16083 231 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 MAS1LP35410 378 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 LPAR6P43657 344 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 TAS2R31P59538 309 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 ATP5G2Q06055 141 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 KLF5Q13887 457 aaPredicted RBP10.16□□□□□ -0.78
RNF4-215ENST00000511843 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 LAX1Q8IWV1 398 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 FCAMRQ8WWV6 532 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 OR4C12Q96R67 309 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 PLEKHA2Q9HB19 425 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 SLC2A9Q9NRM0 540 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 FBXL7Q9UJT9 491 aa10.16□□□□□ -0.78
RNF4-215ENST00000511843 ZNF257Q9Y2Q1 563 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms