RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 KLF14Q8TD94 323 aaPredicted RBP12.52□□□□□ -0.41
USP38-202ENST00000510377 SGK494Q96LW2 274 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 SEMA5BQ9P283 1151 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 K7ESF4 209 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 SP1P08047 785 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 GZMHP20718 246 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 PRDX2P32119 198 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 B3GALT5-AS1P59052 145 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 WDYHV1Q96HA8 205 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 ZNF703Q9H7S9 590 aaPredicted RBP12.52□□□□□ -0.41
USP38-202ENST00000510377 PCNX2A6NKB5 2137 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 TNFSF4P23510 183 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 LBHQ53QV2 105 aaPredicted RBP12.51□□□□□ -0.41
USP38-202ENST00000510377 OR4S2Q8NH73 311 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 NPVFQ9HCQ7 196 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 TMEM242Q9NWH2 141 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 RRHO14718 337 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 IGKV1-39P01597 117 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 APOA2P02652 100 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 IGKV1D-39P04432 117 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 FTH1P19P0C7X4 201 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 USF1P22415 310 aaPredicted RBP12.51□□□□□ -0.41
USP38-202ENST00000510377 PTTG1IPP53801 180 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 ZADH2Q8N4Q0 377 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 TRGV10A0A0A0MS01 117 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 SERF1AO75920 110 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 PLAUP00749 431 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 APELAP0DMC3 54 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 ADMP35318 185 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 SPCS3P61009 180 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 RTL8BQ17RB0 113 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 ZNF585BQ52M93 769 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 Q56UQ5 140 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 C11orf42Q8N5U0 333 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 SSBP3Q9BWW4 388 aaPredicted RBP12.51□□□□□ -0.41
USP38-202ENST00000510377 CBY1Q9Y3M2 126 aa12.51□□□□□ -0.41
USP38-202ENST00000510377 PSPNO60542 156 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 COX5BP10606 129 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 RND2P52198 227 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 CRIP3Q6Q6R5 217 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 MMD2Q8IY49 270 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 SLC24A4Q8NFF2 622 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 MS4A5Q9H3V2 200 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 ZNF835Q9Y2P0 537 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 Q0VFX4 171 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 PSG7Q13046 419 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 HAPLN4Q86UW8 402 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 ZPBPQ9BS86 351 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 TMEM140Q9NV12 185 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 XIRP2A4UGR9 3374 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 CYC1P08574 325 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 GATA2P23769 480 aaPredicted RBP12.5□□□□□ -0.41
USP38-202ENST00000510377 ZNF71Q9NQZ8 489 aaPredicted RBP12.5□□□□□ -0.41
USP38-202ENST00000510377 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 TCF19Q9Y242 345 aa12.5□□□□□ -0.41
USP38-202ENST00000510377 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
USP38-202ENST00000510377 MKRN2OSH3BPM6 223 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 VENTXO95231 258 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 MPV17P39210 176 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 REG1BP48304 166 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 TFPI2P48307 235 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 LHX2P50458 406 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 GNB1P62873 340 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 KLHDC1Q8N7A1 406 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 MUC22E2RYF6 1773 aaPredicted RBP12.49□□□□□ -0.41
USP38-202ENST00000510377 CGAP01215 116 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 PFN1P07737 140 aaKnown RBP12.49□□□□□ -0.41
USP38-202ENST00000510377 BRS3P32247 399 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 OPRK1P41145 380 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 HINT1P49773 126 aaPredicted RBP12.49□□□□□ -0.41
USP38-202ENST00000510377 MFAP2P55001 183 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 ERHP84090 104 aaKnown RBP12.49□□□□□ -0.41
USP38-202ENST00000510377 PRR31Q5SQ13 230 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 STUMQ69YW2 141 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 ZNRF1Q8ND25 227 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 SPSB4Q96A44 273 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 TMEM45BQ96B21 275 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 WNT10AQ9GZT5 417 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 CDH23Q9H251 3354 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 ZNF503-AS2A6NEH8 195 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 SRIP30626 198 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 ZNF497Q6ZNH5 498 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 SCRT1Q9BWW7 348 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 LINC00470Q9BZP3 86 aa12.49□□□□□ -0.41
USP38-202ENST00000510377 ORM2P19652 201 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 GCHFRP30047 84 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 CLDN18P56856 261 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 OCC1Q8TAD7 63 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 ZCCHC14Q8WYQ9 949 aaKnown RBP12.48□□□□□ -0.41
USP38-202ENST00000510377 LOXL4Q96JB6 756 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 TECRQ9NZ01 308 aaKnown RBP12.48□□□□□ -0.41
USP38-202ENST00000510377 WIPI2Q9Y4P8 454 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 C20orf202A1L168 122 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 J3QR06 171 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 M0QZK8 103 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 GGCTO75223 188 aaKnown RBP12.48□□□□□ -0.41
USP38-202ENST00000510377 CD82P27701 267 aa12.48□□□□□ -0.41
USP38-202ENST00000510377 SPATA45Q537H7 98 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms