RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	COA4	Q9NYJ1	87 aa		4.17	□□□□□ -1.74
ATXN3-210	ENST00000507965	RSL24D1	Q9UHA3	163 aa	Known RBP	4.17	□□□□□ -1.74
ATXN3-210	ENST00000507965	TNC	P24821	2201 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	TRBV6-6	A0A0A6YYG2	114 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	IRGM	A1A4Y4	181 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	RBMY1B	A6NDE4	496 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	RBMY1E	A6NEQ0	496 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	CCDC160	A6NGH7	325 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	SRRM4	A7MD48	611 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	TMEM14DP	A8MWL7	114 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965		H0Y980	276 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965		H3BUA1	57 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	ZNF701	M0R085	212 aa	Predicted RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	ITGB1BP1	O14713	200 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	MYL12B	O14950	172 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	CNIH1	O95406	144 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	SCGB1D1	O95968	90 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	APOA2	P02652	100 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	MBP	P02686	304 aa	Predicted RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	IFNA6	P05013	189 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	CRYGB	P07316	175 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	RBMY1D	P0C7P1	496 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	UBB	P0CG47	229 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	ZBTB25	P24278	435 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	CD40LG	P29965	261 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	CEACAM6	P40199	344 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	WNT4	P56705	351 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	TAS2R43	P59537	309 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	SUMO2	P61956	95 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	PLA2G7	Q13093	441 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	EXOSC2	Q13868	293 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	RPEL1	Q2QD12	228 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	C1orf100	Q5SVJ3	147 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	C10orf55	Q5SWW7	151 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	RNLS	Q5VYX0	342 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	ZNF343	Q6P1L6	599 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	ZNF773	Q6PK81	442 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	IDO2	Q6ZQW0	420 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	GPR141	Q7Z602	305 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	ADAD2	Q8NCV1	583 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	OR13F1	Q8NGS4	319 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	CACNG8	Q8WXS5	425 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	MAFIP	Q8WZ33	124 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	HARBI1	Q96MB7	349 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	TSNAX	Q99598	290 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	NEURL2	Q9BR09	285 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	AIFM2	Q9BRQ8	373 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	NAA50	Q9GZZ1	169 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	OR2D2	Q9H210	308 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	SRD5A3	Q9H8P0	318 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965		Q9N2K0	584 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	C12orf4	Q9NQ89	552 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	PLEKHJ1	Q9NW61	149 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	RDH8	Q9NYR8	311 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	GHRL	Q9UBU3	117 aa		4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	PEF1	Q9UBV8	284 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965	PLEC	Q15149	4684 aa	Known RBP	4.16	□□□□□ -1.74
ATXN3-210	ENST00000507965		A0A0G2JLM5	398 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	EFCAB10	A6NFE3	127 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	PPP5D1	E7EU14	171 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965		H3BMQ9	156 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	BET1	O15155	118 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	TPPP	O94811	219 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	OR2A4	O95047	310 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	HLA-A	P01891	365 aa	Known RBP	4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	CRHBP	P24387	322 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	MAPK3	P27361	379 aa	Predicted RBP	4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	LGALS7	P47929	136 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	PCP4	P48539	62 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	CLDN12	P56749	244 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	GABARAPL2	P60520	117 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	RHOG	P84095	191 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	TNXA	Q16473	311 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	MOGAT2	Q3SYC2	334 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	ACSM3	Q53FZ2	586 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	IGSF11	Q5DX21	431 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	PLAC9	Q5JTB6	97 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	GPR107	Q5VW38	600 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	TTC23	Q5W5X9	447 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	GLT8D1	Q68CQ7	371 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965		Q6ZWC4	215 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	CEACAM19	Q7Z692	300 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	C8orf59	Q8N0T1	100 aa	Predicted RBP	4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	NANOGP1	Q8N7R0	232 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	KCNG3	Q8TAE7	436 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	SRSF12	Q8WXF0	261 aa	Known RBP	4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	ACOT12	Q8WYK0	555 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	DDB2	Q92466	427 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	PTX4	Q96A99	478 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	ARHGAP5-AS1	Q96IT6	56 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	PHB2	Q99623	299 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	RNF5	Q99942	180 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	PECR	Q9BY49	303 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	SDHAF2	Q9NX18	166 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	PPP1R14D	Q9NXH3	145 aa		4.15	□□□□□ -1.75
ATXN3-210	ENST00000507965	SIGLEC8	Q9NYZ4	499 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms