RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 FYTTD1Q96QD9 318 aaKnown RBP8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 OR2A7Q96R45 310 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 GPHA2Q96T91 129 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 HSD17B10Q99714 261 aaKnown RBP8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 FAM110AQ9BQ89 295 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 WFDC10AQ9H1F0 79 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 TXNL4BQ9NX01 149 aaKnown RBP8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 TAS2R8Q9NYW2 309 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 DAPK2Q9UIK4 370 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 FBXL7Q9UJT9 491 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 SPATA2Q9UM82 520 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 DMRT1Q9Y5R6 373 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 A0A1B0GW64 132 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 DPPA5A6NC42 116 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 C2orf70A6NJV1 201 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 ZNF785A8K8V0 405 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 NPIPB5A8MRT5 1133 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 E7EUB6 86 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 GGCTO75223 188 aaKnown RBP8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 SCGNO76038 276 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 IL6RP08887 468 aaPredicted RBP8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 FOLR2P14207 255 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 AREGP15514 252 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 FGF9P31371 208 aaPredicted RBP8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 BRWD1-AS2P59051 145 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 GUCA2BQ16661 112 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 DEFB114Q30KQ6 69 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 FAM209BQ5JX69 171 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 UBE2UQ5VVX9 321 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 DEFB125Q8N687 156 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 CCDC140Q96MF4 163 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 HIPK2Q9H2X6 1198 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 SLC2A8Q9NY64 477 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 ANXA10Q9UJ72 324 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 S4R3C0 116 aa8.71□□□□□ -1.02
HMGCS1-204ENST00000507293 RBMY1BA6NDE4 496 aaKnown RBP8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 RBMY1EA6NEQ0 496 aaKnown RBP8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 MRPS14O60783 128 aaKnown RBP8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 NDUFB8O95169 186 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 OR2C1O95371 312 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 RBMY1DP0C7P1 496 aaKnown RBP8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 ZNF735P0CB33 412 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 MYOD1P15172 320 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 MAS1LP35410 378 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 KIR2DS2P43631 304 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 SFXN4Q6P4A7 337 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 CLEC19AQ6UXS0 136 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 ZNF66Q6ZN08 573 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 SSX9Q7RTT3 188 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 TPRA1Q86W33 373 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 SPARTQ8N0X7 666 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 MFSD4AQ8N468 514 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 CACNG8Q8WXS5 425 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 WDR89Q96FK6 387 aaPredicted RBP8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 FANCD2OSQ96PS1 177 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 SRD5A3Q9H8P0 318 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 ZC4H2Q9NQZ6 224 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 SLC2A9Q9NRM0 540 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 RHBDL2Q9NX52 303 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 SELENOKQ9Y6D0 94 aa8.7□□□□□ -1.02
HMGCS1-204ENST00000507293 OR11H12B2RN74 326 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 LGALS9O00182 355 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 TNFSF12O43508 249 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 HRASP01112 189 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 CRYGCP07315 174 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 PTHLHP12272 177 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 PSMB6P28072 239 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 ARL3P36405 182 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 ARPC4P59998 168 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 OR13F1Q8NGS4 319 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 SECTM1Q8WVN6 248 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 FCGR1BQ92637 280 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 EEF1AKMT3Q96AZ1 226 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 YTHDF1Q9BYJ9 559 aaKnown RBP8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 CCL28Q9NRJ3 127 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 TECRQ9NZ01 308 aaKnown RBP8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 SSR3Q9UNL2 185 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 STARD9Q9P2P6 4700 aa8.69□□□□□ -1.02
HMGCS1-204ENST00000507293 TRAV18A0A075B6X5 111 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 CGB1A6NKQ9 187 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 DHFRP00374 187 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 REG1AP05451 166 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 CLEC2LP0C7M8 214 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 CTRB1P17538 263 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 HLA-GP17693 338 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 CBLN1P23435 193 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 FCGR2CP31995 323 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 SDC2P34741 201 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 RPL8P62917 257 aaKnown RBP8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 MXD1Q05195 221 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 TIMM50Q3ZCQ8 353 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 CTRB2Q6GPI1 263 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 GPHB5Q86YW7 130 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 TMEM61Q8N0U2 210 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 GVQW1Q8N7I0 195 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 BEST4Q8NFU0 473 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 OR5H6Q8NGV6 325 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 SLC25A38Q96DW6 304 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 RNF167Q9H6Y7 350 aa8.68□□□□□ -1.02
HMGCS1-204ENST00000507293 BET1LQ9NYM9 111 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms