RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 IGKV3OR2-268A0A0C4DH90 116 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 IGHV1-69-2A0A0G2JMI3 117 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 TRBV6-5A0A0K0K1A5 114 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 TINCRA0A1B0GVN0 87 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 FABP12A6NFH5 140 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 A6NJ64 397 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 A8MUN3 132 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 GOLGA8MH3BSY2 632 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 H7C2G1 150 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 MRPS14O60783 128 aaKnown RBP0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 ZNF737O75373 536 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 PGLYRP1O75594 196 aaPredicted RBP0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 ADAP1O75689 374 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 CRPP02741 224 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 MSMBP08118 114 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 OCM2P0CE71 109 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 MYL12AP19105 171 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 MSNP26038 577 aaKnown RBP0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 G6PCP35575 357 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 CLDN12P56749 244 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 MAP3K7CLP57077 242 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 UBE2G2P60604 165 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 POLR2GP62487 172 aaKnown RBP eCLIP0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 JOSD1Q15040 202 aaPredicted RBP0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 ELOBQ15370 118 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 NDUFA5Q16718 116 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 LRRC75BQ2VPJ9 315 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 SLC36A2Q495M3 483 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 TMEM155Q4W5P6 130 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 CST9Q5W186 159 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 HIST2H3AQ71DI3 136 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 SLC36A1Q7Z2H8 476 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 GPHB5Q86YW7 130 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 RIBC1Q8N443 379 aaPredicted RBP0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 TBC1D19Q8N5T2 526 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 EEF1AKMT1Q8WVE0 214 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 DNAJB3Q8WWF6 145 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 CMTM5Q96DZ9 223 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 GNPNAT1Q96EK6 184 aaPredicted RBP0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 ZNF514Q96K75 400 aaPredicted RBP0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 IMMP2LQ96T52 175 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 TTTY13Q9BZ97 58 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 DERL2Q9GZP9 239 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 DRC3Q9H069 523 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 HDHD2Q9H0R4 259 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 OR51I2Q9H344 312 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 GPR84Q9NQS5 396 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 AK3Q9UIJ7 227 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 C15orf41Q9Y2V0 281 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 SMARCA4P51532 1647 aa0.46□□□□□ -2.34
HMGB1P29-201ENST00000505659 FLT4P35916 1363 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 ABCC12Q96J65 1359 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 MAST2Q6P0Q8 1798 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 EXPH5Q8NEV8 1989 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 IGKV3-7A0A075B6H7 116 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 TMED7-TICAM2A0A0A6YYA0 188 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 A0A0D9SEW6 157 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 C1orf232A0A0U1RR37 186 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 A0A1B0GV50 99 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 LINC00854A0A1B0GVQ3 168 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 TMEM269A0A1B0GVZ9 245 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 MEIS3P1A6NDR6 274 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 GOLGA8KD6RF30 607 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 F5H768 121 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 H3BT86 120 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 COX7A2LO14548 114 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 ITGB1BP1O14713 200 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 PFDN6O15212 129 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 ORC5O43913 435 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 NOS1APO75052 506 aaPredicted RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 IL3P08700 152 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 RPSAP08865 295 aaKnown RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 LGALS1P09382 135 aaKnown RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 UCHL3P15374 230 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 NFYAP23511 347 aaPredicted RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 CASQ1P31415 396 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 RPL28P46779 137 aaKnown RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 CSN1S1P47710 185 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 RAB13P51153 203 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 RPL30P62888 115 aaKnown RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 SKP1P63208 163 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 CAV1Q03135 178 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 FABP9Q0Z7S8 132 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 ACSM3Q53FZ2 586 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 OGFRL1Q5TC84 451 aaPredicted RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 PDPK2PQ6A1A2 396 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 SBSNQ6UWP8 590 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 C7orf65Q6ZTY9 151 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 FP248Q71RG6 208 aaPredicted RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 DCXRQ7Z4W1 244 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 DYNAPQ8N1N2 210 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 SLC22A24Q8N4F4 322 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 RPP25LQ8N5L8 163 aaKnown RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 OR2T27Q8NH04 317 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 RNASE6Q93091 150 aaKnown RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 ROPN1LQ96C74 230 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 UPF3BQ9BZI7 483 aaKnown RBP0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 CHST6Q9GZX3 395 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 FAM96AQ9H5X1 160 aa0.45□□□□□ -2.34
HMGB1P29-201ENST00000505659 HRASLSQ9HDD0 168 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms