RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 MRPS15P82914 257 aaKnown RBP7.44□□□□□ -1.22
NEDD9-210ENST00000505589 RHOGP84095 191 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 ZNF846Q147U1 533 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 RAB11BQ15907 218 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 TMEM177Q53S58 311 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 SPANXN2Q5MJ10 180 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 C6orf201Q7Z4U5 140 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 CCDC190Q86UF4 302 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 TTC9CQ8N5M4 171 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 STPG3Q8N7X2 389 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 SAMD12Q8N8I0 201 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 ZNF383Q8NA42 475 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 DRAXINQ8NBI3 349 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-210ENST00000505589 OR6M1Q8NGM8 313 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 LGALS14Q8TCE9 139 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 GATAD1Q8WUU5 269 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 ADTRPQ96IZ2 230 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 WDR12Q9GZL7 423 aaKnown RBP7.44□□□□□ -1.22
NEDD9-210ENST00000505589 MFFQ9GZY8 342 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 PLGRKTQ9HBL7 147 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 ADAM30Q9UKF2 790 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 ETV7Q9Y603 341 aa7.44□□□□□ -1.22
NEDD9-210ENST00000505589 TRBV9A0A0B4J1U6 114 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 KIR2DL5BA0A0G2JN68 375 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 KIR2DL5BA0A0G2JPC4 375 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 A0A0J9YWU9 116 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 M0R1X1 148 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 BMPR1BO00238 502 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 TRBV12-3P01733 135 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 SNRPBP14678 240 aaKnown RBP7.43□□□□□ -1.22
NEDD9-210ENST00000505589 TNFSF8P32971 234 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 UBE2KP61086 200 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 HLA-DRB3P79483 266 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 EXOSC2Q13868 293 aaKnown RBP7.43□□□□□ -1.22
NEDD9-210ENST00000505589 TNXAQ16473 311 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 UBE2NLQ5JXB2 153 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 C1orf100Q5SVJ3 147 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 LYG2Q86SG7 212 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 KIR2DL5AQ8N109 375 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 KIR2DL5BQ8NHK3 375 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 SRSF12Q8WXF0 261 aaKnown RBP7.43□□□□□ -1.22
NEDD9-210ENST00000505589 TM2D1Q9BX74 207 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 ZNF230Q9UIE0 474 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-210ENST00000505589 HSF4Q9ULV5 492 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 SPATA2Q9UM82 520 aa7.43□□□□□ -1.22
NEDD9-210ENST00000505589 RBM7Q9Y580 266 aaKnown RBP7.43□□□□□ -1.22
NEDD9-210ENST00000505589 PROP1O75360 226 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 DIRAS3O95661 229 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 IGLV2-23P01705 113 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 APOA1P02647 267 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 EIF4EP06730 217 aaKnown RBP7.42□□□□□ -1.22
NEDD9-210ENST00000505589 MYOD1P15172 320 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 ELK1P19419 428 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 HTR2CP28335 458 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 CMC4P56277 68 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-210ENST00000505589 CLDN12P56749 244 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 ZNF45Q02386 682 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 PJVKQ0ZLH3 352 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 P2RY14Q15391 338 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 TM4SF20Q53R12 229 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 LAMTOR1Q6IAA8 161 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 CNIH2Q6PI25 160 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 MMD2Q8IY49 270 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 OR2C3Q8N628 320 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 OR4A4PQ8NGN8 299 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 OR1L6Q8NGR2 347 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 OR5H6Q8NGV6 325 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 OSR1Q8TAX0 266 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-210ENST00000505589 BORCS5Q969J3 196 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 FAM3DQ96BQ1 224 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 WDR89Q96FK6 387 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-210ENST00000505589 CMTM3Q96MX0 182 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 PARP12Q9H0J9 701 aaKnown RBP7.42□□□□□ -1.22
NEDD9-210ENST00000505589 Q9N2K0 584 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 RDH8Q9NYR8 311 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 MRPL27Q9P0M9 148 aaKnown RBP7.42□□□□□ -1.22
NEDD9-210ENST00000505589 ZNF257Q9Y2Q1 563 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 V9GYH0 126 aa7.42□□□□□ -1.22
NEDD9-210ENST00000505589 ZNF320A2RRD8 509 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 TRDCB7Z8K6 153 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 OR2C1O95371 312 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 HIST1H1BP16401 226 aaKnown RBP7.41□□□□□ -1.22
NEDD9-210ENST00000505589 PTBP1P26599 531 aaKnown RBP eCLIP7.41□□□□□ -1.22
NEDD9-210ENST00000505589 TALDO1P37837 337 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 ELLP55199 621 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-210ENST00000505589 PRSS8Q16651 343 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 C15orf32Q32M92 178 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 C5orf24Q7Z6I8 188 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 RPP25LQ8N5L8 163 aaKnown RBP7.41□□□□□ -1.22
NEDD9-210ENST00000505589 OR10J5Q8NHC4 309 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 VSTM2AQ8TAG5 236 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 PHLDA1Q8WV24 401 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-210ENST00000505589 SLC25A38Q96DW6 304 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 DIRAS2Q96HU8 199 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 CMSS1Q9BQ75 279 aaKnown RBP7.41□□□□□ -1.22
NEDD9-210ENST00000505589 C12orf4Q9NQ89 552 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 RHBDL2Q9NX52 303 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 EXTL2Q9UBQ6 330 aa7.41□□□□□ -1.22
NEDD9-210ENST00000505589 TRBV7-1A0A0A6YYK4 115 aa7.4□□□□□ -1.22
NEDD9-210ENST00000505589 FAM25AB3EWG3 89 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms