RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RBPMSQ93062 196 aaKnown RBP6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 OR2A7Q96R45 310 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 OR51J1Q9H342 316 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 IGLC7A0M8Q6 106 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 PEX14O75381 377 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 FCGR2BP31994 310 aaPredicted RBP6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 DHRS2Q13268 280 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 TCTEX1D4Q5JR98 221 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 Q6ZRM9 215 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 MOB3BQ86TA1 216 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 SPAG16Q8N0X2 631 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 VSTM2AQ8TAG5 236 aa6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 ZNF430Q9H8G1 570 aaPredicted RBP6.5□□□□□ -1.37
CDC42SE2-208ENST00000505065 E7EUB6 86 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 HRASP01112 189 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 HLA-AP01891 365 aaKnown RBP6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 LYL1P12980 280 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 DCTN2Q13561 401 aaKnown RBP6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 GPHA2Q96T91 129 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 HSPB7Q9UBY9 170 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 FCN1O00602 326 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 KCNAB3O43448 404 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 FXYD4P59646 89 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 BLCAPP62952 87 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 MZT2BQ6NZ67 158 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 NPFFR1Q9GZQ6 430 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 FLVCR2Q9UPI3 526 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 TENM1Q9UKZ4 2725 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 FAM181BA6NEQ2 426 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 LINC01548A6NM66 108 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 FAM90A26D6RGX4 464 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 PRSS46E5RG02 174 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 LPAR6P43657 344 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 VDAC2P45880 294 aaPredicted RBP6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 CENPSQ8N2Z9 138 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 DRAXINQ8NBI3 349 aaPredicted RBP6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 OR51H1Q8NH63 302 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 TCTEX1D2Q8WW35 142 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 ZDHHC16Q969W1 377 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 RBMXL1Q96E39 390 aaKnown RBP6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 TMEM140Q9NV12 185 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 CACFD1Q9UGQ2 172 aa6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 C14orf166Q9Y224 244 aaKnown RBP6.49□□□□□ -1.37
CDC42SE2-208ENST00000505065 CLPSL1A2RUU4 121 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 CENPXA8MT69 81 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 FCGR3BO75015 233 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 TSPAN5P62079 268 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 COMMD1Q8N668 190 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 R3HDM4Q96D70 268 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 HARBI1Q96MB7 349 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 A0A1B0GU03 582 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 PHLDA2Q53GA4 152 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 TMEM219Q86XT9 240 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 OR5B3Q8NH48 314 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 ZNF431Q8TF32 576 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 FYTTD1Q96QD9 318 aaKnown RBP6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 PRSS22Q9GZN4 317 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 TRAV3A0A0B4J244 114 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 TEX50A0A1B0GTY4 177 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 CRYZL1O95825 349 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 PRCDQ00LT1 54 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 FOXE3Q13461 319 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 ZNF57Q68EA5 555 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 MMD2Q8IY49 270 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 STPG2Q8N412 459 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 FAM110DQ8TAY7 271 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 CAPSLQ8WWF8 208 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 ASB13Q8WXK3 278 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 TMED3Q9Y3Q3 217 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 IGHV3-72A0A0B4J1Y9 119 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 TNFSF12O43508 249 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 CREBL2O60519 120 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 CTRB1P17538 263 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 VDAC1P21796 283 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 CD24P25063 80 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 SCGB2B2Q4G0G5 96 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 AWAT1Q58HT5 328 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 CTRB2Q6GPI1 263 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 HSD17B13Q7Z5P4 300 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 SLC35G3Q8N808 338 aa6.48□□□□□ -1.37
CDC42SE2-208ENST00000505065 TRRAPQ9Y4A5 3859 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 CA2P00918 260 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 H2AFB2P0C5Z0 115 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 CX3CL1P78423 397 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 FHL3Q13643 280 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 SGPP2Q8IWX5 399 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 RHOVQ96L33 236 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 METTL1Q9UBP6 276 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 NAV3Q8IVL0 2385 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 SOX15O60248 233 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 PI3P19957 117 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 ANXA7P20073 488 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 ID3Q02535 119 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 VMA21Q3ZAQ7 101 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 LIN54Q6MZP7 749 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 OR4F5Q8NH21 305 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 TMEM170AQ8WVE7 144 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 C22orf15Q8WYQ4 148 aa6.47□□□□□ -1.37
CDC42SE2-208ENST00000505065 GPR146Q96CH1 333 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms