RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 RPS16P62249 146 aaKnown RBP7.53□□□□□ -1.2
TPM3-218ENST00000505010 SSX2Q16385 188 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 MIDNQ504T8 468 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 TMEM177Q53S58 311 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 GPR157Q5UAW9 335 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 OR4A47Q6IF82 309 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 CCDC144NLQ6NUI1 221 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 C11orf87Q6NUJ2 197 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 C12orf54Q6X4T0 127 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 Q6ZRM9 215 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 OR8H3Q8N146 312 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 FAM71E2Q8N5Q1 922 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 OR11H4Q8NGC9 324 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 OR4D5Q8NGN0 318 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 OR4A16Q8NH70 328 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 OSR1Q8TAX0 266 aaPredicted RBP7.53□□□□□ -1.2
TPM3-218ENST00000505010 C17orf50Q8WW18 174 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 DCUN1D4Q92564 292 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 FLYWCH2Q96CP2 140 aaKnown RBP7.53□□□□□ -1.2
TPM3-218ENST00000505010 RHOVQ96L33 236 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 MS4A7Q9GZW8 240 aaPredicted RBP7.53□□□□□ -1.2
TPM3-218ENST00000505010 MAGT1Q9H0U3 335 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 ZFP57Q9NU63 452 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 OR5AC2Q9NZP5 309 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 RCL1Q9Y2P8 373 aaKnown RBP7.53□□□□□ -1.2
TPM3-218ENST00000505010 OOSP1A8MZH6 123 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 ST8SIA3O43173 380 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 OR9G9P0C7N8 305 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 SAA1P0DJI8 122 aaPredicted RBP7.52□□□□□ -1.21
TPM3-218ENST00000505010 IGHV4-38-2P0DP08 117 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 SLC25A4P12235 298 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 ARHGDIBP52566 201 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 IL15RAQ13261 267 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 POU2AF1Q16633 256 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 CXorf66Q5JRM2 361 aaPredicted RBP7.52□□□□□ -1.21
TPM3-218ENST00000505010 CYB5R2Q6BCY4 276 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 PRSS54Q6PEW0 395 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 BRD3OSQ6XYD6 125 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 DYNAPQ8N1N2 210 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 C9orf62Q8N4C0 152 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 OR4C13Q8NGP0 309 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 AIFM2Q9BRQ8 373 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.52□□□□□ -1.21
TPM3-218ENST00000505010 COA4Q9NYJ1 87 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 NSG2Q9Y328 171 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 POMT1Q9Y6A1 747 aa7.52□□□□□ -1.21
TPM3-218ENST00000505010 TRAV3A0A0B4J244 114 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 FAM90A9PA6NNJ1 464 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 H0YIZ8 118 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 L7N2F9 121 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 PITX3O75364 302 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 DEDDO75618 318 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 SNAPC5O75971 98 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 VENTXO95231 258 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 IGKV1D-33P01593 117 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 IGKV1-33P01594 117 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 RLN2P04090 185 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 PVALBP20472 110 aaPredicted RBP7.51□□□□□ -1.21
TPM3-218ENST00000505010 NUP62P37198 522 aaPredicted RBP7.51□□□□□ -1.21
TPM3-218ENST00000505010 POLR2GP62487 172 aaKnown RBP eCLIP7.51□□□□□ -1.21
TPM3-218ENST00000505010 VAMP2P63027 116 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 HES1Q14469 280 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 VMA21Q3ZAQ7 101 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 ZNF546Q86UE3 836 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 CFHR4Q92496 578 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 MALSU1Q96EH3 234 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 TSNAXQ99598 290 aaKnown RBP7.51□□□□□ -1.21
TPM3-218ENST00000505010 QTRT1Q9BXR0 403 aaKnown RBP7.51□□□□□ -1.21
TPM3-218ENST00000505010 HSPB11Q9Y547 144 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 TGP01266 2768 aa7.51□□□□□ -1.21
TPM3-218ENST00000505010 MGAM2Q2M2H8 2515 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 A0A0U1RQK1 487 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 C15orf61A6NNL5 157 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 SRRM4A7MD48 611 aaKnown RBP7.5□□□□□ -1.21
TPM3-218ENST00000505010 HMSDA8MTL9 139 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 FAM90A26D6RGX4 464 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 E5RGE8 158 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 UPK2O00526 184 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 SLC25A17O43808 307 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 KBTBD11O94819 623 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 AVPP01185 164 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 IGLV2-23P01705 113 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 SNRNP70P08621 437 aaKnown RBP7.5□□□□□ -1.21
TPM3-218ENST00000505010 IAPPP10997 89 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 LYL1P12980 280 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 CD24P25063 80 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 CD1BP29016 333 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 AP2S1P53680 142 aaPredicted RBP7.5□□□□□ -1.21
TPM3-218ENST00000505010 UBE2KP61086 200 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 RELBQ01201 579 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 TNFRSF9Q07011 255 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 HABP2Q14520 560 aaPredicted RBP7.5□□□□□ -1.21
TPM3-218ENST00000505010 HNF4GQ14541 408 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 SPINK9Q5DT21 86 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 FAM120AOSQ5T036 256 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 IL17RELQ6ZVW7 336 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 INO80EQ8NBZ0 244 aaPredicted RBP7.5□□□□□ -1.21
TPM3-218ENST00000505010 SGMS2Q8NHU3 365 aa7.5□□□□□ -1.21
TPM3-218ENST00000505010 VSTM2AQ8TAG5 236 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms