RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 DYRK1AQ13627 763 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 ADAD2Q8NCV1 583 aaKnown RBP10.98□□□□□ -0.65
HOXC9-202ENST00000504557 VSTM2AQ8TAG5 236 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 TMEM68Q96MH6 324 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 SPIN2AQ99865 258 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 SPIN2BQ9BPZ2 258 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 ZMAT5Q9UDW3 170 aaKnown RBP10.98□□□□□ -0.65
HOXC9-202ENST00000504557 RBMXL2O75526 392 aaKnown RBP10.97□□□□□ -0.65
HOXC9-202ENST00000504557 TRBV12-3P01733 135 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 REG1AP05451 166 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 RHOGP84095 191 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 CD69Q07108 199 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 OR4A47Q6IF82 309 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 CLVS1Q8IUQ0 354 aaPredicted RBP10.97□□□□□ -0.65
HOXC9-202ENST00000504557 LYSMD2Q8IV50 215 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 PUSL1Q8N0Z8 303 aaKnown RBP10.97□□□□□ -0.65
HOXC9-202ENST00000504557 ZBTB34Q8NCN2 500 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 DMBX1Q8NFW5 382 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 TMEM167AQ8TBQ9 72 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 AP3S1Q92572 193 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 FXYD6Q9H0Q3 95 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 EXTL2Q9UBQ6 330 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 ADAM30Q9UKF2 790 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 ANAPC10Q9UM13 185 aa10.97□□□□□ -0.65
HOXC9-202ENST00000504557 ZNF256Q9Y2P7 627 aaPredicted RBP10.97□□□□□ -0.65
HOXC9-202ENST00000504557 E7EUB6 86 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 M0QYG6 137 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 RGS5O15539 181 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 OR2J3O76001 311 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 S1PR2O95136 353 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 ZNF182P17025 639 aaPredicted RBP10.96□□□□□ -0.65
HOXC9-202ENST00000504557 GNRHRP30968 328 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 SPCS2Q15005 226 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 PHLDA2Q53GA4 152 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 ZNF429Q86V71 674 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 OR6F1Q8NGZ6 308 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 GPX8Q8TED1 209 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 MOB3AQ96BX8 217 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 OR4C12Q96R67 309 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 RANGRFQ9HD47 186 aaPredicted RBP10.96□□□□□ -0.65
HOXC9-202ENST00000504557 AKIP1Q9NQ31 210 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 S4R3C0 116 aa10.96□□□□□ -0.65
HOXC9-202ENST00000504557 TRAV3A0A0B4J244 114 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 IGHV3-23P01764 117 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 IL6RP08887 468 aaPredicted RBP10.95□□□□□ -0.66
HOXC9-202ENST00000504557 AREGP15514 252 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 NAT1P18440 290 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 ZP3P21754 424 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 RCVRNP35243 200 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 ALDH3B2P48448 385 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 SYNJ2BPP57105 145 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
HOXC9-202ENST00000504557 ZNF45Q02386 682 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 ATP5G2Q06055 141 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 EXOSC2Q13868 293 aaKnown RBP10.95□□□□□ -0.66
HOXC9-202ENST00000504557 MSMO1Q15800 293 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 DHRS11Q6UWP2 260 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 CMTM3Q96MX0 182 aa10.95□□□□□ -0.66
HOXC9-202ENST00000504557 PEF1Q9UBV8 284 aaKnown RBP10.95□□□□□ -0.66
HOXC9-202ENST00000504557 TEX22C9J3V5 150 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 PGLYRP1O75594 196 aaPredicted RBP10.94□□□□□ -0.66
HOXC9-202ENST00000504557 HPRT1P00492 218 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 NQO2P16083 231 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 SPNP16150 400 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 HLA-GP17693 338 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 INSL3P51460 131 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 ERVK-16P61578 105 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 RPEL1Q2QD12 228 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 C11orf87Q6NUJ2 197 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 ACSM6Q6P461 480 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 CMTM1Q8IZ96 169 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 TTC9CQ8N5M4 171 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 BORCS5Q969J3 196 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 USMG5Q96IX5 58 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 ELOVL1Q9BW60 279 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 SCPEP1Q9HB40 452 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 TMEM140Q9NV12 185 aa10.94□□□□□ -0.66
HOXC9-202ENST00000504557 A0A1B0GW64 132 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 GPR31O00270 319 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 MAS1LP35410 378 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 LPAR6P43657 344 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 TAS2R31P59538 309 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 ZNF343Q6P1L6 599 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 SLC25A42Q86VD7 318 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 OR52I2Q8NH67 350 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 ASCL2Q99929 193 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 AIFM2Q9BRQ8 373 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 HINT2Q9BX68 163 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 BET1LQ9NYM9 111 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 KLK11Q9UBX7 282 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 FBXL7Q9UJT9 491 aa10.93□□□□□ -0.66
HOXC9-202ENST00000504557 FAM223BA6NKX1 122 aa10.92□□□□□ -0.66
HOXC9-202ENST00000504557 PPP5D1E7EU14 171 aa10.92□□□□□ -0.66
HOXC9-202ENST00000504557 UPK2O00526 184 aa10.92□□□□□ -0.66
HOXC9-202ENST00000504557 RBFOX2O43251 390 aaKnown RBP eCLIP10.92□□□□□ -0.66
HOXC9-202ENST00000504557 KRASP01116 189 aa10.92□□□□□ -0.66
HOXC9-202ENST00000504557 IFNA6P05013 189 aa10.92□□□□□ -0.66
HOXC9-202ENST00000504557 ZNF735P0CB33 412 aa10.92□□□□□ -0.66
HOXC9-202ENST00000504557 DEFA4P12838 97 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms