RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 KRTAP29-1A8MX34 341 aaPredicted RBP8.86□□□□□ -0.99
LSM6-204ENST00000504181 NAPSAO96009 420 aa8.86□□□□□ -0.99
LSM6-204ENST00000504181 RRASP10301 218 aa8.86□□□□□ -0.99
LSM6-204ENST00000504181 HLA-DRB3P79483 266 aa8.86□□□□□ -0.99
LSM6-204ENST00000504181 LHFPL3Q86UP9 236 aa8.86□□□□□ -0.99
LSM6-204ENST00000504181 GPR148Q8TDV2 347 aa8.86□□□□□ -0.99
LSM6-204ENST00000504181 NEDD4LQ96PU5 975 aa8.86□□□□□ -0.99
LSM6-204ENST00000504181 OR2T8A6NH00 312 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 CRYGCP07315 174 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 RPL27AP46776 148 aaKnown RBP8.85□□□□□ -0.99
LSM6-204ENST00000504181 DLK1P80370 383 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 TMEM88Q6PEY1 159 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 ZNF66Q6ZN08 573 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 MOB1BQ7L9L4 216 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 TRPT1Q86TN4 253 aaKnown RBP8.85□□□□□ -0.99
LSM6-204ENST00000504181 ACBD7Q8N6N7 88 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 CSNK1G2-AS1Q8NCQ2 148 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 RHPN1-AS1Q9BWJ2 59 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 RDH8Q9NYR8 311 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 PTTG2Q9NZH5 202 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 SMPXQ9UHP9 88 aa8.85□□□□□ -0.99
LSM6-204ENST00000504181 K7EMT4 169 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 NDUFA4O00483 81 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 CHEK1O14757 476 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 SPP1P10451 314 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 GTF2A1P52655 376 aaPredicted RBP8.84□□□□□ -0.99
LSM6-204ENST00000504181 EMP1P54849 157 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 KLK9Q2XQG4 91 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 FAM24BQ8N5W8 94 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 OR6M1Q8NGM8 313 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 OR8J1Q8NGP2 316 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 OSR1Q8TAX0 266 aaPredicted RBP8.84□□□□□ -0.99
LSM6-204ENST00000504181 MRPL48Q96GC5 212 aaKnown RBP8.84□□□□□ -0.99
LSM6-204ENST00000504181 CMTM3Q96MX0 182 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 HDHD3Q9BSH5 251 aaPredicted RBP8.84□□□□□ -0.99
LSM6-204ENST00000504181 SMPD3Q9NY59 655 aaPredicted RBP8.84□□□□□ -0.99
LSM6-204ENST00000504181 KLK9Q9UKQ9 250 aa8.84□□□□□ -0.99
LSM6-204ENST00000504181 IGHV3OR16-13A0A075B7E8 117 aa8.83□□□□□ -1
LSM6-204ENST00000504181 IGHV3-74A0A0B4J1X5 117 aa8.83□□□□□ -1
LSM6-204ENST00000504181 IGKV1-6A0A0C4DH72 117 aa8.83□□□□□ -1
LSM6-204ENST00000504181 IGHV7-4-1A0A0J9YVY3 117 aa8.83□□□□□ -1
LSM6-204ENST00000504181 LINC00473A8K010 186 aa8.83□□□□□ -1
LSM6-204ENST00000504181 ZNF735P0CB33 412 aa8.83□□□□□ -1
LSM6-204ENST00000504181 SPART-AS1P0CW21 52 aa8.83□□□□□ -1
LSM6-204ENST00000504181 IGFBP3P17936 291 aaPredicted RBP8.83□□□□□ -1
LSM6-204ENST00000504181 BTF3P20290 206 aaKnown RBP8.83□□□□□ -1
LSM6-204ENST00000504181 PSMD7P51665 324 aa8.83□□□□□ -1
LSM6-204ENST00000504181 GBX2P52951 348 aaPredicted RBP8.83□□□□□ -1
LSM6-204ENST00000504181 PLA2G7Q13093 441 aa8.83□□□□□ -1
LSM6-204ENST00000504181 TPBGQ13641 420 aa8.83□□□□□ -1
LSM6-204ENST00000504181 VKORC1L1Q8N0U8 176 aa8.83□□□□□ -1
LSM6-204ENST00000504181 SYS1Q8N2H4 156 aa8.83□□□□□ -1
LSM6-204ENST00000504181 TMEM116Q8NCL8 245 aa8.83□□□□□ -1
LSM6-204ENST00000504181 IMPAD1Q9NX62 359 aa8.83□□□□□ -1
LSM6-204ENST00000504181 TAGLN3Q9UI15 199 aa8.83□□□□□ -1
LSM6-204ENST00000504181 TRAV8-7A0A075B6U6 113 aa8.82□□□□□ -1
LSM6-204ENST00000504181 TRBV5-7A0A0A0MS05 114 aa8.82□□□□□ -1
LSM6-204ENST00000504181 DFFBO76075 338 aa8.82□□□□□ -1
LSM6-204ENST00000504181 POLR2IP36954 125 aaKnown RBP8.82□□□□□ -1
LSM6-204ENST00000504181 PAFAH1B2P68402 229 aa8.82□□□□□ -1
LSM6-204ENST00000504181 HAMPP81172 84 aa8.82□□□□□ -1
LSM6-204ENST00000504181 IRF3Q14653 427 aa8.82□□□□□ -1
LSM6-204ENST00000504181 OR2G6Q5TZ20 316 aa8.82□□□□□ -1
LSM6-204ENST00000504181 FAM90A2PQ658T7 463 aa8.82□□□□□ -1
LSM6-204ENST00000504181 CCDC124Q96CT7 223 aaKnown RBP8.82□□□□□ -1
LSM6-204ENST00000504181 NRBF2Q96F24 287 aa8.82□□□□□ -1
LSM6-204ENST00000504181 DCUN1D5Q9BTE7 237 aa8.82□□□□□ -1
LSM6-204ENST00000504181 LRP1Q07954 4544 aaKnown RBP8.81□□□□□ -1
LSM6-204ENST00000504181 KNCNA6PVL3 124 aa8.81□□□□□ -1
LSM6-204ENST00000504181 C15orf62A8K5M9 175 aa8.81□□□□□ -1
LSM6-204ENST00000504181 DNASE2O00115 360 aaPredicted RBP8.81□□□□□ -1
LSM6-204ENST00000504181 CD3GP09693 182 aa8.81□□□□□ -1
LSM6-204ENST00000504181 PTBP1P26599 531 aaKnown RBP eCLIP8.81□□□□□ -1
LSM6-204ENST00000504181 DUTP33316 252 aaKnown RBP8.81□□□□□ -1
LSM6-204ENST00000504181 MRPL28Q13084 256 aaKnown RBP8.81□□□□□ -1
LSM6-204ENST00000504181 TCF24Q7RTU0 167 aa8.81□□□□□ -1
LSM6-204ENST00000504181 C15orf53Q8NAA6 179 aa8.81□□□□□ -1
LSM6-204ENST00000504181 BSCL2Q96G97 398 aaPredicted RBP8.81□□□□□ -1
LSM6-204ENST00000504181 NIPSNAP3BQ9BS92 247 aa8.81□□□□□ -1
LSM6-204ENST00000504181 OR51E2Q9H255 320 aa8.81□□□□□ -1
LSM6-204ENST00000504181 RAB27BO00194 218 aa8.8□□□□□ -1
LSM6-204ENST00000504181 KBTBD11O94819 623 aa8.8□□□□□ -1
LSM6-204ENST00000504181 ICAM4Q14773 271 aa8.8□□□□□ -1
LSM6-204ENST00000504181 KDM4DQ6B0I6 523 aa8.8□□□□□ -1
LSM6-204ENST00000504181 XAF1Q6GPH4 301 aa8.8□□□□□ -1
LSM6-204ENST00000504181 MFSD4AQ8N468 514 aa8.8□□□□□ -1
LSM6-204ENST00000504181 LGALS12Q96DT0 336 aa8.8□□□□□ -1
LSM6-204ENST00000504181 KRTAP1-5Q9BYS1 174 aa8.8□□□□□ -1
LSM6-204ENST00000504181 MS4A6AQ9H2W1 248 aa8.8□□□□□ -1
LSM6-204ENST00000504181 CKLFQ9UBR5 152 aa8.8□□□□□ -1
LSM6-204ENST00000504181 EXOGQ9Y2C4 368 aaKnown RBP8.8□□□□□ -1
LSM6-204ENST00000504181 TRBV6-6A0A0A6YYG2 114 aa8.79□□□□□ -1
LSM6-204ENST00000504181 IGHV3-21A0A0B4J1V1 117 aa8.79□□□□□ -1
LSM6-204ENST00000504181 FCGR3BO75015 233 aa8.79□□□□□ -1
LSM6-204ENST00000504181 FKBP6O75344 327 aa8.79□□□□□ -1
LSM6-204ENST00000504181 HTR2CP28335 458 aa8.79□□□□□ -1
LSM6-204ENST00000504181 KRTAP10-1P60331 282 aa8.79□□□□□ -1
LSM6-204ENST00000504181 OR2B11Q5JQS5 317 aa8.79□□□□□ -1
LSM6-204ENST00000504181 OR10K2Q6IF99 312 aa8.79□□□□□ -1
LSM6-204ENST00000504181 SPSB3Q6PJ21 355 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms