RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 IFNA17P01571 189 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 IGKV1D-33P01593 117 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 IGKV1-33P01594 117 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 IGHV4-38-2P0DP08 117 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 TMEM11P17152 192 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 LRRC75BQ2VPJ9 315 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 BRD3OSQ6XYD6 125 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 MMD2Q8IY49 270 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 CIB3Q96Q77 187 aaPredicted RBP12.14□□□□□ -0.47
SGCA-204ENST00000504073 COMMD5Q9GZQ3 224 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 MEGF9Q9H1U4 602 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 PITPNC1Q9UKF7 332 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 LSM5Q9Y4Y9 91 aaKnown RBP12.14□□□□□ -0.47
SGCA-204ENST00000504073 POMT1Q9Y6A1 747 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
SGCA-204ENST00000504073 FLNAP21333 2647 aaKnown RBP12.13□□□□□ -0.47
SGCA-204ENST00000504073 MPTX1A8MV57 137 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 E5RGE8 158 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 NBR2O15453 112 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 KBTBD11O94819 623 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 SCAF4O95104 1147 aaKnown RBP12.13□□□□□ -0.47
SGCA-204ENST00000504073 MPC2O95563 127 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 SNRNP70P08621 437 aaKnown RBP12.13□□□□□ -0.47
SGCA-204ENST00000504073 SAA1P0DJI8 122 aaPredicted RBP12.13□□□□□ -0.47
SGCA-204ENST00000504073 MAS1LP35410 378 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 SRP14P37108 136 aaKnown RBP12.13□□□□□ -0.47
SGCA-204ENST00000504073 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
SGCA-204ENST00000504073 MMDQ15546 238 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 C11orf87Q6NUJ2 197 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 PRSS54Q6PEW0 395 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 NOXA1Q86UR1 476 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 ZNF429Q86V71 674 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 INO80EQ8NBZ0 244 aaPredicted RBP12.13□□□□□ -0.47
SGCA-204ENST00000504073 OR4D5Q8NGN0 318 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 OR52E5Q8NH55 327 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 CFHR4Q92496 578 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 MDFIQ99750 246 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 NSG2Q9Y328 171 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 NBEAL1Q6ZS30 2694 aa12.13□□□□□ -0.47
SGCA-204ENST00000504073 NSD1Q96L73 2696 aaPredicted RBP12.13□□□□□ -0.47
SGCA-204ENST00000504073 FXYD6-FXYD2A0A087WZ82 144 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 C15orf61A6NNL5 157 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 UPK2O00526 184 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 PITX3O75364 302 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 P0C879 139 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 SLC25A4P12235 298 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 F2RL1P55085 397 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 SPCS3P61009 180 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 RPL23AP62750 156 aaKnown RBP12.12□□□□□ -0.47
SGCA-204ENST00000504073 RPL8P62917 257 aaKnown RBP12.12□□□□□ -0.47
SGCA-204ENST00000504073 RPP30P78346 268 aaKnown RBP12.12□□□□□ -0.47
SGCA-204ENST00000504073 ID3Q02535 119 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 RAB32Q13637 225 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 EBI3Q14213 229 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 PUSL1Q8N0Z8 303 aaKnown RBP12.12□□□□□ -0.47
SGCA-204ENST00000504073 CIARTQ8N365 385 aaPredicted RBP12.12□□□□□ -0.47
SGCA-204ENST00000504073 OR5B3Q8NH48 314 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 TMEM167AQ8TBQ9 72 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 ZDHHC16Q969W1 377 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
SGCA-204ENST00000504073 ZC4H2Q9NQZ6 224 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 YAE1D1Q9NRH1 226 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 METTL1Q9UBP6 276 aaKnown RBP12.12□□□□□ -0.47
SGCA-204ENST00000504073 FOXA2Q9Y261 457 aaPredicted RBP12.12□□□□□ -0.47
SGCA-204ENST00000504073 ZNF257Q9Y2Q1 563 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 ABCA1O95477 2261 aa12.12□□□□□ -0.47
SGCA-204ENST00000504073 A0A0G2JRQ6 117 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 HMSDA8MTL9 139 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 RRHO14718 337 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 SYNGR2O43760 224 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 SLC25A17O43808 307 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 FOSL1P15407 271 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 TNFRSF9Q07011 255 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 IL15RAQ13261 267 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
SGCA-204ENST00000504073 LDLRAD2Q5SZI1 272 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 C9orf139Q6ZV77 190 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 VKORC1L1Q8N0U8 176 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 DCUN1D4Q92564 292 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 HIPK2Q9H2X6 1198 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 VPS13CQ709C8 3753 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 STAB1Q9NY15 2570 aa12.11□□□□□ -0.47
SGCA-204ENST00000504073 NCBP2LA6PVI3 153 aaKnown RBP12.1□□□□□ -0.47
SGCA-204ENST00000504073 K7EPK0 472 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 M0QZK8 103 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 DEDDO75618 318 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 AVPP01185 164 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 MBPP02686 304 aaPredicted RBP12.1□□□□□ -0.47
SGCA-204ENST00000504073 OR9G9P0C7N8 305 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
SGCA-204ENST00000504073 RELBQ01201 579 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 HNF4GQ14541 408 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 PSG5Q15238 335 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 TMEM65Q6PI78 240 aa12.1□□□□□ -0.47
SGCA-204ENST00000504073 RBMS3Q6XE24 437 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms