RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 SEM1Q6ZVN7 128 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 SSX7Q7RTT5 188 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 CISD2Q8N5K1 135 aaKnown RBP3.22□□□□□ -1.89
ALYREF-201ENST00000504015 C8orf31Q8N9H6 132 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 OR51G1Q8NGK1 321 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 OR2T10Q8NGZ9 312 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 OR4F5Q8NH21 305 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 UBALD1Q8TB05 177 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 OR2V2Q96R30 315 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 OR4F4Q96R69 305 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 QTRT1Q9BXR0 403 aaKnown RBP3.22□□□□□ -1.89
ALYREF-201ENST00000504015 OPN3Q9H1Y3 402 aaPredicted RBP3.22□□□□□ -1.89
ALYREF-201ENST00000504015 IFI27L2Q9H2X8 130 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 PARLQ9H300 379 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 VSIRQ9H7M9 311 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 ENY2Q9NPA8 101 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 PARD6AQ9NPB6 346 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 NIT2Q9NQR4 276 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 GSN-AS1Q9NRJ2 163 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 TMEM14BQ9NUH8 114 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 GFOD1Q9NXC2 390 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 IDI2-AS1Q9NZ38 188 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 DUSP13Q9UII6 198 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 METRNQ9UJH8 293 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 PRNDQ9UKY0 176 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 DMRT1Q9Y5R6 373 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 LY96Q9Y6Y9 160 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 SPTAN1Q13813 2472 aaKnown RBP3.22□□□□□ -1.89
ALYREF-201ENST00000504015 DMDP11532 3685 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 SHANK1Q9Y566 2161 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 TEX15Q9BXT5 2789 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 ESPL1Q14674 2120 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 MED12LQ86YW9 2145 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 CACNA1HO95180 2353 aa3.22□□□□□ -1.89
ALYREF-201ENST00000504015 NOTCH2Q04721 2471 aa3.21□□□□□ -1.89
ALYREF-201ENST00000504015 FREM1Q5H8C1 2179 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 IGHV3-43A0A0B4J1X8 118 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TRAV38-1A0A0B4J264 116 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 hADV38S2A0JD32 116 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 NKX6-3A6NJ46 265 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 C11orf94C9JXX5 98 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 C3orf80F5H4A9 247 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 PRRG2O14669 202 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 PHOX2AO14813 284 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HMGB3O15347 200 aaKnown RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H2BKO60814 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 PAGE4O60829 102 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 FSTL3O95633 263 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 IGHV2-70P01814 119 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 GYPAP02724 150 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TRGC2P03986 189 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H2BJP06899 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TRGC1P0CF51 173 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 IGHV3-43DP0DP04 118 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 EGR1P18146 543 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 SPINK2P20155 84 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H2BOP23527 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 NPY1RP25929 384 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 CD40P25942 277 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H2BBP33778 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 PDLIM4P50479 330 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 EDDM3BP56851 147 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H2BDP58876 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 RHOBP62745 196 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H2BCP62807 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 MRPS11P82912 194 aaKnown RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 RPL19P84098 196 aaKnown RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TLE1Q04724 770 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TFF3Q07654 80 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ADIRFQ15847 76 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST2H2BEQ16778 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 CT45A1Q5HYN5 189 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 OR4A47Q6IF82 309 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ZNF343Q6P1L6 599 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ZNF474Q6S9Z5 364 aaPredicted RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 FAM180AQ6UWF9 173 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TREML4Q6UXN2 200 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ZNF788Q6ZQV5 615 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 SSX9Q7RTT3 188 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ASCL5Q7RTU5 278 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 MOGAT3Q86VF5 341 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 LRP11Q86VZ4 500 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST3H2BBQ8N257 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 PNKDQ8N490 385 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 Q8N7P7 452 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TPRX1Q8N7U7 411 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ZNRF1Q8ND25 227 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ZNF439Q8NDP4 499 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 SLC24A4Q8NFF2 622 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 OR5B3Q8NH48 314 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 OR4A5Q8NH83 315 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 CT45A3Q8NHU0 189 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 RFESDQ8TAC1 157 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 OSR1Q8TAX0 266 aaPredicted RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 RNASEH2CQ8TDP1 164 aaKnown RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ABHD5Q8WTS1 349 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ITLN1Q8WWA0 313 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 CACNG8Q8WXS5 425 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TMEM190Q8WZ59 177 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms