RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ARF3P61204 181 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 UBE2G1P62253 170 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ARF1P84077 181 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 RPL18Q07020 188 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TESK1Q15569 626 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 CD226Q15762 336 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 GABRA6Q16445 453 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FAM78BQ5VT40 261 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 PARM1Q6UWI2 310 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 DGAT2L6Q6ZPD8 337 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SPATA12Q7Z6I5 190 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 VSTM2AQ8TAG5 236 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 BLNKQ8WV28 456 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ADTRPQ96IZ2 230 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 CXXC4Q9H2H0 198 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 DNAJB12Q9NXW2 375 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 KLHDC2Q9Y2U9 406 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 WASHC3Q9Y3C0 194 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 MKI67P46013 3256 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TEX50A0A1B0GTY4 177 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FAM231BA6NCW3 169 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 LRRC30A6NM36 301 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 K7EQM0 130 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SAP18O00422 153 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SERF1AO75920 110 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 GYPAP02724 150 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 IGLC1P0CG04 106 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TAS2R45P59539 299 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 RPL15P61313 204 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 GPM6BQ13491 265 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ABHD17BQ5VST6 288 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FAM90A1Q86YD7 464 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SELENOHQ8IZQ5 122 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR8B12Q8NGG6 310 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR1N2Q8NGR9 330 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR10AC1Q8NH08 325 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 LMX1AQ8TE12 382 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 NEUROG1Q92886 237 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 RITA1Q96K30 269 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 NKX3-1Q99801 234 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 QTRT1Q9BXR0 403 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FGF22Q9HCT0 170 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 LIN7CQ9NUP9 197 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TAAR3PQ9P1P4 343 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ABI3Q9P2A4 366 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 HSPB8Q9UJY1 196 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 RCL1Q9Y2P8 373 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FAM24AA6NFZ4 105 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SNURFLB1AK76 121 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 H3BRM9 83 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF205O95201 554 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 PPYP01298 95 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR4A8P0C604 315 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 LINC00346Q8IVM7 164 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TDHQ8IZJ6 230 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 MUC15Q8N387 334 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ZIC4Q8N9L1 334 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR5D13Q8NGL4 314 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR10S1Q8NGN2 331 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR4F5Q8NH21 305 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 Q8TCH9 128 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR4F4Q96R69 305 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 A0A1B0GW15 77 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 C11orf94C9JXX5 98 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 GNB3P16520 340 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 VIPR2P41587 438 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 SPEM2Q0P670 501 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 GAGE5Q13069 117 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 GAGE6Q13070 117 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 ADIPOQQ15848 244 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 DCAF12Q5T6F0 453 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 UNQ6494/PRO21346Q6UXR6 183 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 OR10G7Q8NGN6 311 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 OR1L3Q8NH93 324 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 KLK6Q92876 244 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 MRGPRFQ96AM1 343 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 BORCS8Q96FH0 119 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 EMC9Q9Y3B6 208 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 RALGAPA1Q6GYQ0 2036 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 IGHV1OR21-1A0A087WYE8 117 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 OR2W5A6NFC9 320 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 GDF1P27539 372 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 FABP6P51161 128 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 METAP1P53582 386 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM50BP56557 158 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 RIPPLY3P57055 190 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 CX3CL1P78423 397 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 NMSQ5H8A3 153 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 CDPF1Q6NVV7 123 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 FOXI2Q6ZQN5 318 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 GJC3Q8NFK1 279 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 DAZLQ92904 295 aaKnown RBP2.34□□□□□ -2.03
NEDD4-204ENST00000503468 CHCHD1Q96BP2 118 aaKnown RBP2.34□□□□□ -2.03
NEDD4-204ENST00000503468 NUS1Q96E22 293 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 RAX2Q96IS3 184 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 MRPL18Q9H0U6 180 aaKnown RBP2.34□□□□□ -2.03
NEDD4-204ENST00000503468 LINC00597Q9H2U6 94 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 RAB9BQ9NP90 201 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 SIGLEC8Q9NYZ4 499 aa2.34□□□□□ -2.03
NEDD4-204ENST00000503468 CHCHD2Q9Y6H1 151 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms