RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 CT45A3Q8NHU0 189 aa13□□□□□ -0.33
LMNA-217ENST00000498722 RRNAD1Q96FB5 475 aaKnown RBP13□□□□□ -0.33
LMNA-217ENST00000498722 C5orf30Q96GV9 206 aa13□□□□□ -0.33
LMNA-217ENST00000498722 ADTRPQ96IZ2 230 aa13□□□□□ -0.33
LMNA-217ENST00000498722 RNF126Q9BV68 326 aa13□□□□□ -0.33
LMNA-217ENST00000498722 LSM5Q9Y4Y9 91 aaKnown RBP13□□□□□ -0.33
LMNA-217ENST00000498722 KANTRA0A1W2PQU2 76 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 TMEM89A2RUT3 159 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 BUB1B-PAK6H3BSN5 160 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 ST8SIA3O43173 380 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 DEDDO75618 318 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 IGLV1-47P01700 117 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 DUTP33316 252 aaKnown RBP12.99□□□□□ -0.33
LMNA-217ENST00000498722 ZNF134P52741 427 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 AKR1C2P52895 323 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 RPL30P62888 115 aaKnown RBP12.99□□□□□ -0.33
LMNA-217ENST00000498722 FOXL1Q12952 345 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 AANATQ16613 207 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 ZNF585BQ52M93 769 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 SPAG16Q8N0X2 631 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 C8orf31Q8N9H6 132 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 RPEQ96AT9 228 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 S1PR3Q99500 378 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 PRELID3BQ9Y3B1 194 aa12.99□□□□□ -0.33
LMNA-217ENST00000498722 E5RGE8 158 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 H0YIZ8 118 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 K7EPK0 472 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 M0R1X1 148 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 SLC31A2O15432 143 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 IGKV1-39P01597 117 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 MBPP02686 304 aaPredicted RBP12.98□□□□□ -0.33
LMNA-217ENST00000498722 IGKV1D-39P04432 117 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 PVALBP20472 110 aaPredicted RBP12.98□□□□□ -0.33
LMNA-217ENST00000498722 NKX2-1P43699 371 aaPredicted RBP12.98□□□□□ -0.33
LMNA-217ENST00000498722 THBS3P49746 956 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 LYG1Q8N1E2 194 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 FAM71E2Q8N5Q1 922 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 OR1S1Q8NH92 325 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 GPR146Q96CH1 333 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 PLEKHA2Q9HB19 425 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 OR5AC2Q9NZP5 309 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 NSG2Q9Y328 171 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 TENM1Q9UKZ4 2725 aa12.98□□□□□ -0.33
LMNA-217ENST00000498722 RNF222A6NCQ9 220 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.336e-8■■□□□ 14.4
LMNA-217ENST00000498722 AP2S1P53680 142 aaPredicted RBP12.97□□□□□ -0.33
LMNA-217ENST00000498722 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
LMNA-217ENST00000498722 AWAT1Q58HT5 328 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 TPTE2P1Q5T6R2 138 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 FOXRED2Q8IWF2 684 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 LINC00311Q8N616 119 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 C3orf56Q8N813 242 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 OR8H1Q8NGG4 311 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 AQP10Q96PS8 301 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 C1RLQ9NZP8 487 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 MMP24Q9Y5R2 645 aa12.97□□□□□ -0.33
LMNA-217ENST00000498722 SAA2-SAA4A0A096LPE2 208 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 LINC00473A8K010 186 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 BCL2L11O43521 198 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 HPRT1P00492 218 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 IFNA7P01567 189 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 SAA2P0DJI9 122 aaPredicted RBP12.96□□□□□ -0.33
LMNA-217ENST00000498722 BRS3P32247 399 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 ZNF816Q0VGE8 651 aaPredicted RBP12.96□□□□□ -0.33
LMNA-217ENST00000498722 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 CCDC144NLQ6NUI1 221 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 FAM71F2Q6NXP2 309 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 TEX261Q6UWH6 196 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 SLC51BQ86UW2 128 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 TMEM219Q86XT9 240 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 ODF3L1Q8IXM7 274 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 OR4F5Q8NH21 305 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 ARPC5LQ9BPX5 153 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 RCL1Q9Y2P8 373 aaKnown RBP12.96□□□□□ -0.33
LMNA-217ENST00000498722 U3KQ87 197 aa12.96□□□□□ -0.33
LMNA-217ENST00000498722 WRBO00258 174 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 PROP1O75360 226 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 PITX3O75364 302 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 IGKV1-5P01602 117 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 MDKP21741 143 aaPredicted RBP12.95□□□□□ -0.34
LMNA-217ENST00000498722 CD24P25063 80 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 IL3RAP26951 378 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 P2RY1P47900 373 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 ID3Q02535 119 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 OR2B11Q5JQS5 317 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 OR4S2Q8NH73 311 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 COA4Q9NYJ1 87 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 PITPNC1Q9UKF7 332 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 TCF19Q9Y242 345 aa12.95□□□□□ -0.34
LMNA-217ENST00000498722 FAM90A26D6RGX4 464 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 RAMP3O60896 148 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 FCGR3BO75015 233 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 S1PR2O95136 353 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 VAMP2P63027 116 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 RELBQ01201 579 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 TAGLNQ01995 201 aaKnown RBP12.94□□□□□ -0.34
LMNA-217ENST00000498722 NDUFA5Q16718 116 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 PIFOQ8TCI5 191 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 DDB2Q92466 427 aa12.94□□□□□ -0.34
LMNA-217ENST00000498722 ZNF251Q9BRH9 671 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms